Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4355g00006 ATGTTGTGTAAGAAAGGTGGTGATCTTAAACCAAAATGTCAAGCATTTTGTCAGGATGAAGTTCTTAGTATTACCAGTAACTTCGAATCAGTAATTGGAGAAGGGGGGTTTGGAAAAGTGTACCTTGGAAAATTACAAGATGGTACACAAGTTGCAGTAAAATTACTTTCTAAGTCATCACAACAAGGATTTAATGAGTTTGAATCAGAGGCAAAATTATTATCCATGGTTTATCATAAGAACTTGCTTTCTCTTGTTGGTTACTGTGACAATGGTGACATAAGAGCATTGATTTATGAATATATGGCAAAGGGACATCTCCATCACCAATTGTCAGGTAAAAACCCTTATGTTTTAAAGTGGAATGAGAGACTTCAAATAGCATTAGATGCAGCGTGTGGGCTAAACTATCTACACAATTGCTGTAACCCACCAATAATTCATAGAGACCTAAAATCATCTAATATCTTGCTAAGTGAAAACATGCATGCTAAGATTGCTGATTTTGGACTATGTAAAGCTTTTACAAGTGACACCGACACTCACATTTCAACTCGTCCGGCTGGCACGTTTGGTTACATAGATCCTGAATTTTATAGATTTGGAAACTTGCACAAATCCAGCGATGTTTACAGTTTTGGGATAATTCTACTTGAGTTGATGACGGGTCGATCAGCAATTATGAGAACAGCTGAAGGCAAGAGTCACATTGTTGATTGGATCAGTCCAAAGTTTGAGGCTGGGGATATAGAATCCATTATGGATCCAAAGTTAGAGGGGAACTTCAATATCTCTTCAGCAAGAAAGGTTTTAGAGATAGCCATGTGTTGCACTAAACCAAATGGTGTGAAAAGACCAGATATAAGTAATGTAGAGAATTATCTAAAGCAATGTTTGGCCTTGGACACATTGCCCGAAGGTGCAGAAAGCAGCAGTTTATTCTCAAGCACCACATTTGATTCCAGTTTTTATCAATGTGGATCATCACACTCACCGCCATTATCTGTCAGGGAAGAATGTTTGTAG 1026 0.3782 MLCKKGGDLKPKCQAFCQDEVLSITSNFESVIGEGGFGKVYLGKLQDGTQVAVKLLSKSSQQGFNEFESEAKLLSMVYHKNLLSLVGYCDNGDIRALIYEYMAKGHLHHQLSGKNPYVLKWNERLQIALDAACGLNYLHNCCNPPIIHRDLKSSNILLSENMHAKIADFGLCKAFTSDTDTHISTRPAGTFGYIDPEFYRFGNLHKSSDVYSFGIILLELMTGRSAIMRTAEGKSHIVDWISPKFEAGDIESIMDPKLEGNFNISSARKVLEIAMCCTKPNGVKRPDISNVENYLKQCLALDTLPEGAESSSLFSSTTFDSSFYQCGSSHSPPLSVREECL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4355g00006 341 ProSiteProfiles Protein kinase domain profile. 26 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00006 341 PANTHER OS07G0107800 PROTEIN-RELATED 11 306 - -
Pral4355g00006 341 SMART serkin_6 26 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00006 341 CDD STKc_IRAK 32 297 - -
Pral4355g00006 341 Gene3D Phosphorylase Kinase; domain 1 32 102 - -
Pral4355g00006 341 Pfam Protein tyrosine and serine/threonine kinase 28 291 IPR001245 GO:0004672|GO:0006468
Pral4355g00006 341 SUPERFAMILY Protein kinase-like (PK-like) 14 295 IPR011009 -
Pral4355g00006 341 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 102 306 - -
Pral4355g00006 341 Gene3D Transferase(Phosphotransferase) domain 1 103 308 - -
Pral4355g00006 341 FunFam receptor-like protein kinase FERONIA 4 101 - -
Pral4355g00006 341 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Pral4355g00006 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4355g00006 Pral-Chr4355 72993 74734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4355g00006 12 322 Receptor kinase-like Gene Family AT1G51890 48.562 4.55e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4355g00006 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4355g00006 - - pcin:129290778 551.206