Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4353g00012 ATGACCGTCCTTATTTATCTGATGAACATGAGAATCAAAAGGAAGAAGCAAGGAGCATTTAAGAAAGAAGGGCGGGAGAATTCAAAGAAACAAGTATTTTCTCTGAGAGAGGTTACTAGAATTACCAGTAACTTCAAAACTGTTATTGGGAAAGGTGGGTTTGGAGAAGTTTACCTTGGCACAGTGCAAGATGGTAAAGAAGTTGCAGTGAAGTTACTTTCTCAGACATCAAGGCAAGGATACAGGGAGTTTCACTCAGAGGTAGATTTGTTGACTTTCGTTCATCATAAAAACTTGGTTTCTTTTATGGGGTACTGTGAAGAAGGTGATGTGAAAGCATTGATTTATGAATATATGGCAAAGGGGAATCTGCAACAGCTGTTGTCAGATGAAAATCCAACTGTTTTGAAGTGGTTTGATAGACTTCAAATTGCCCTGGATGTTGCATTTGGATTGGAGTATTTGCATTATGGTATCAAGCCTCCCATAGTTCACAGGGACTTGAAGACCTCCAATATTTTGTTGGATGAGAACATGCAACCTGCAATGAAACCAGAATCACTTGGAATCAAGATACAATTACTTGATTGGGTTAATCCTAAACTTAATGGAGATATTGACTCCATAGTTGATCCAAGGTTAGAAGGACAGTACAATAGAAGTTCAGCATGGAAACTTGTAGAAATTGCCATGTCCTGCGCCCAACCTACTGCAATCCAAAGGCCTGACATAAGTGAAGTGTTGACTGAGCTAAAGGACTGTTTGGCTTCAGAAATAAGCCATGAAAGATCAGAGAGCAGCATGAGAAGGTCCAGGAATAATTCACTGGAAACAAGTTCTTTGAATCCTTTTCAGATTGATTCATCATTAGGCCCACATGCTAGATAA 888 0.393 MTVLIYLMNMRIKRKKQGAFKKEGRENSKKQVFSLREVTRITSNFKTVIGKGGFGEVYLGTVQDGKEVAVKLLSQTSRQGYREFHSEVDLLTFVHHKNLVSFMGYCEEGDVKALIYEYMAKGNLQQLLSDENPTVLKWFDRLQIALDVAFGLEYLHYGIKPPIVHRDLKTSNILLDENMQPAMKPESLGIKIQLLDWVNPKLNGDIDSIVDPRLEGQYNRSSAWKLVEIAMSCAQPTAIQRPDISEVLTELKDCLASEISHERSESSMRRSRNNSLETSSLNPFQIDSSLGPHAR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4353g00012 295 Gene3D Transferase(Phosphotransferase) domain 1 183 278 - -
Pral4353g00012 295 Gene3D Transferase(Phosphotransferase) domain 1 119 182 - -
Pral4353g00012 295 MobiDBLite consensus disorder prediction 271 287 - -
Pral4353g00012 295 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Pral4353g00012 295 PANTHER OS07G0107800 PROTEIN-RELATED 5 260 - -
Pral4353g00012 295 Pfam Protein tyrosine and serine/threonine kinase 45 179 IPR001245 GO:0004672|GO:0006468
Pral4353g00012 295 MobiDBLite consensus disorder prediction 259 295 - -
Pral4353g00012 295 SUPERFAMILY Protein kinase-like (PK-like) 29 249 IPR011009 -
Pral4353g00012 295 Gene3D Phosphorylase Kinase; domain 1 25 118 - -
Pral4353g00012 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral4353g00012 295 ProSiteProfiles Protein kinase domain profile. 43 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4353g00012 295 FunFam Leucine-rich repeat receptor-like protein kinase 20 118 - -
Pral4353g00012 295 SMART serkin_6 43 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4353g00012 Pral-Chr4353 112375 115671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4353g00012 28 295 Receptor kinase-like Gene Family AT2G04300 40.120 1.41e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4353g00012 PK_Tyr_Ser-Thr 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4353g00012 - - qsa:O6P43_018241 279.641