Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4353g00011 ATGAACATTGCATCTGAATGGATGCTTCTTTTCCTTGCTTTCTTCATTCCTCTTCAACTCCCAAGCTTGTTAGCCTCTACTGATACAGGTTACATAAACATAGATTGTGGGGCAGAGGAGGCCTACACTGACAGTGACAGCAATATTGCTCAACACATTGAGAAGCTCCCGGACGGAGTTAGGAACTGCTATACCCTCACTCCCAAACAGGGTAAAAACAACAAGTATCTAGTTAGAGCTTTCTTTGCTTACAGAAACTACGACTTGAAGCACACGCCACCTTCTTTTGATGTGTATCTTGGCGTGAATCATTGGAACACTATTGAGTTTGGGGATCTCTACATGTATTTTCCCATTGAAGTCACTCATTTTGCTTTGTCAGATACCATAAGTGTGTGTCTTGTGAACATTGGAAAAGGGGTTCCTTTCATTTCGTCCTTGGAACTCTGGCTTCTTACTGATTCTACTTATCGAACCTCCAGTTCGTTTCCGCTGGATATCTTGACTCGGTCAACCTTTAGCATGTCTGAAGATACCTTGTTCGTCAGGTTTGAAGATGATGTGTATGATCGTGTGTGGTTTAACAGAATAGTCGGCAATTCAAAGAAAATATCCACATCAGCAACTATTGATTCTTATGGAATAGAAAATACTAACAAGCTGCCATCACAAGTATTGAAGACTGCAATACAGTCTCTGAGTCTCAACTCTTCCTTGGAAATCTACTTCAATAACCATACTGATAGTTCACACGTGTATTATATCAACCTTTACTTCTTTGAATTTGATCAGCGTGTAACAACTCAGAAAAGGATCGTGGATGTTACTTTCAATGATAAAAGCATCCTCACAGATCCCTTTACTACACAACATCTGAAGCTCGTCACAATTGTTCAGAATATCACACAAGCAGACCATCTTCGTATTTCGATCAAAGCCACCCCAGAATCTGATTTGCCAGCCATGATCAATGCCTTTGAGGTTTATAGAGTACTAAGCCTGACTAATTCAGCAACTTATCAAGAGGATGCTGATACTATTCTGAAAATCAAACATATTTATGGTATCCCCATCATAAATTGGCAAGGGGACCCATGCATTCCAAACCACTTTGCTTGGGAAGAGCTTACTTGCAGCTCTGATGGCACTCCAAGGATTATTTCACTGAACTTGAGCTCAAGGGGACTAACAGGGCCGATAGATGTTTCCTTTTCAAGATTCTCTGAACTACAGTCCTTGGACTTATCATACAACAAACTGACTGGAGAAGTACCAGAATTTCTTGCACAGCTATCAAATTTGAAATTCCTATTGGAAAGAAATCCAGGTCTTTGTCTGGCCAGATCATGCAAGACAAAGAAGAATCTTGTTCCATTAATTGCATCTATTGCAGCATCCGTGGCAGTTCTAGTAATGATTGTCCTTACTTTCCTGATGATCCGGAGAATCAAAAAGAAAAACGGAGTATCTAAGAAAGATTGGCAAGAGAAATCAGACAAATACGTATTTTCTTTAAGGGATGTTAATAGAATTACCAATAACTTCAAAACTAAAATTGGAAAAGGAGGATTTGGAGAAGTTTACCTTGGTACTATGCAAGATGGTAGAGATGTTGCTGTCAAGCTACTTTCTCAGACATCAAGGCAAGGGGATAGGGAGTTTCACTCGGAGGTAAATTTGTTGACTATCGTTCACCATAAAAACCTGGTTTCTTTTGTGGGGTATTGTGACGAAGGTGACGTGAAAGCATTGATCTATGAATATATGGACCAGGGGAATCTGCAAGGGCTATTGTCAGGTAGAAATCCAAATGTCTTGAAGTGGTCAGAAAGACTTCAAATTGCTGTGGATGTTGCACTTGGATTGGACTATCTGCATAACGGTATTAGGCCACCAGTAGTTCATAGAGACTTGAAGACTTCCAATATTTTGTTGAATAAAAAGATGCAAGGCAAGATTTCTGATTTTGGACTCTGTAGACCTTTCATAAATGAAAATGACGCTCATATATCAACCATACCAGCAGGCACATTTGGCTATCTTGATCCCGAATTTCAAAGAACTGGAAAGTTGAACAAAAAGAGTGATGTCTACAGTTTTGGGGTAATTTTGCTGGAGCTGATCACAGGGCAACGTCCTATAAAAGAAGAGGCATCACTTGAAAACAAGGGTCACTTGCTTCATTGGGTTAATCGTAAACTTAAGAATGGAGATATTAAATCTATAGTTGATCCAAGGTTACGAGGAGAATATAATACAAGTTCAGCTTGGAAATTTATAGAGACTGCTATGGGCTGCGTTCCACCTAAAGCGATCCAAAGGCCTGACATTAGTGAAGTATTAAGTGAGCTGAAGATCTGTTTAAACTTGAATCAACAACAGACCCATACTCGTGAAAGATCAGAGACAGAGAGCAGCAGAAGAAATCCCAACAATTCATTGGATATGGGCTCTCTGAACTCACTGGGTATTGAATCAACAGCAGGCCCATATGCTAGATAA 2502 0.3985 MNIASEWMLLFLAFFIPLQLPSLLASTDTGYINIDCGAEEAYTDSDSNIAQHIEKLPDGVRNCYTLTPKQGKNNKYLVRAFFAYRNYDLKHTPPSFDVYLGVNHWNTIEFGDLYMYFPIEVTHFALSDTISVCLVNIGKGVPFISSLELWLLTDSTYRTSSSFPLDILTRSTFSMSEDTLFVRFEDDVYDRVWFNRIVGNSKKISTSATIDSYGIENTNKLPSQVLKTAIQSLSLNSSLEIYFNNHTDSSHVYYINLYFFEFDQRVTTQKRIVDVTFNDKSILTDPFTTQHLKLVTIVQNITQADHLRISIKATPESDLPAMINAFEVYRVLSLTNSATYQEDADTILKIKHIYGIPIINWQGDPCIPNHFAWEELTCSSDGTPRIISLNLSSRGLTGPIDVSFSRFSELQSLDLSYNKLTGEVPEFLAQLSNLKFLLERNPGLCLARSCKTKKNLVPLIASIAASVAVLVMIVLTFLMIRRIKKKNGVSKKDWQEKSDKYVFSLRDVNRITNNFKTKIGKGGFGEVYLGTMQDGRDVAVKLLSQTSRQGDREFHSEVNLLTIVHHKNLVSFVGYCDEGDVKALIYEYMDQGNLQGLLSGRNPNVLKWSERLQIAVDVALGLDYLHNGIRPPVVHRDLKTSNILLNKKMQGKISDFGLCRPFINENDAHISTIPAGTFGYLDPEFQRTGKLNKKSDVYSFGVILLELITGQRPIKEEASLENKGHLLHWVNRKLKNGDIKSIVDPRLRGEYNTSSAWKFIETAMGCVPPKAIQRPDISEVLSELKICLNLNQQQTHTRERSETESSRRNPNNSLDMGSLNSLGIESTAGPYAR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4353g00011 833 MobiDBLite consensus disorder prediction 807 825 - -
Pral4353g00011 833 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 589 797 - -
Pral4353g00011 833 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Pral4353g00011 833 SUPERFAMILY L domain-like 352 437 - -
Pral4353g00011 833 SUPERFAMILY Protein kinase-like (PK-like) 498 784 IPR011009 -
Pral4353g00011 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Pral4353g00011 833 FunFam Leucine-rich repeat receptor-like protein kinase 489 588 - -
Pral4353g00011 833 PANTHER OS07G0107800 PROTEIN-RELATED 25 792 - -
Pral4353g00011 833 FunFam Leucine-rich repeat receptor-like kinase 342 457 - -
Pral4353g00011 833 SMART serkin_6 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4353g00011 833 CDD STKc_IRAK 519 785 - -
Pral4353g00011 833 ProSiteProfiles Protein kinase domain profile. 513 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4353g00011 833 Gene3D Transferase(Phosphotransferase) domain 1 589 812 - -
Pral4353g00011 833 Pfam Protein tyrosine and serine/threonine kinase 515 784 IPR001245 GO:0004672|GO:0006468
Pral4353g00011 833 MobiDBLite consensus disorder prediction 792 833 - -
Pral4353g00011 833 Gene3D Ribonuclease Inhibitor 347 449 IPR032675 -
Pral4353g00011 833 Gene3D Phosphorylase Kinase; domain 1 475 588 - -
Pral4353g00011 833 Pfam Malectin-like domain 41 331 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4353g00011 Pral-Chr4353 105993 111061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4353g00011 8 785 Receptor kinase-like Gene Family AT2G19210 38.751 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4353g00011 Malectin_like 1.2e-63 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4353g00011 - - qsa:O6P43_027692 712.22