Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4353g00006 ATGGAGAGGACAGCACAGTGGATTTTATGGGTTGCCTTGATCCAACTTCTCCTGAATCTTAGCGACGCAATGCTCAGTGGAAGGAAACTCAGCGCCACTACTAGCAACACTCATTCGGATTTCATAAGCATTGATTGTGGAGCAAGCGAGGAATACACTGACCATCAAACTGGGATTTCATATCAGACAGACACAGGTTTTGTAGACACGGGGGATAATTTTATGGTGGCACCTGAAAAAAGATATGACATCTATTATCCTTATTTTGGGAGACAACTGCAGACACTAAGAAGGTTCCCTGAAGGAAGAAGGAATTGCTACACCCTGAAACCAAAACAAGGCAAAAACCAAAGTTACCTCATCCGAGCTTTCTTCTCATATGAAAACTATGATGGCAGAAATCAAACTCCCAGTTTCGAATTGTACCTGGGTGTCAATTATTGGAAAAATATTTATCCAATCAAAAATTATCATTTTGCTGAGATCATCCATACTCCTATGGCTGACACCATCCACGTTTGCCTTGTCAAGTCAGGCAAAGGAATACCTTTCATTTCTACATTAGAACTACGACCTCTCAACAATTCTATCTATACAACTCCCTCCCCTTCTCAATCACTTTTAGAACTTCAAACAAGAATTGATGTTGGCTACGTCAGTAATACTACATCACTACACATCAGGTATATGGATGACATCTACGATCGTACGTGGCGCATGGGCAACACTTTGAACTTGACAGATTGGCATGTGTTCAATAAATCTGTGGATATTGATCCCCAAAGCACAAATGATTCTTACAGATTACCAGCACGAGTGCTATTATCTGCAGCTAAATCATCGAATCGCTCCTCTGCTTTAAACTTTGACTGTGTTTCGGCTTGGGGCGGTCCATTTGAATATTCCTTCACATATTTTGTCTATTTTCATTTTGCTGAAATTGAGCAGCTTCCCCATGGGCAGAAAAGAGTAATCGATATTACTGTAAACGATGAAAAATTCCTCCCAAAGCCCATAACTCTTGAATACTTGAAGCCTCAGACCGTTTTTACAGTTACAAATCAAAGCTGTCTCCGTTTCAGCATAAGTGCAACATCAGAATCTGCTGCGCCTCCAATCCTCAATGCATTCGAGGTTTATCGATTAATATCACCTCTAACTTTACCAACAGACCAAAGAGACGTGGATGCTATCTGGGACATCAAAATCACATACAAAATCTTTAAATTGGATTGGCAAGGTGACCCCTGTATCTCCAATTTTGCATGGAAGGGACTTATGTGCAGTTCTCTCACCGATCACTCTTACGCAAGGATCACCTCATTAAACTTGAGCATGAGCCAGTTAACAGGACACATAGTTATTTCATTCTCACAGCTTTTGGAGTTAGAGTCCCTGGATTTGTCAGATAATAAATTATCAGGAACAATACCAGAATTTCTAGCTAAATTGCCGAAGTTGAAAGTCCTTAATTTGAGAGGCAACAAGCTTACTGGTTCAATTCCAAATATTCTGAAGGAGAAGTCAGATTTGGAAATGAGTTTGGATGGTAATGCTGATCTTTGCTTGACGGATCCATGCAAAAAGCATAAGTTCGCTATTCCCGTGATAGCATCTGTTTCTATTTTGATTGTTGTGATCTTGGTTTTGCTTGGAATATGGTTCTTTGGGATCAAAAGACTGAAAGGGGATTTTACTAGGCGTGAGTCATCAAAACTAAGAAGCAAAGCATTTTCTTACTCCAACGTTCTTGAGATCACTAATAACTTACAAAACTTGATTGGAGAAGGAGGATTTGGAAAGGTTTATTTAGGTAGTCTTAAGAATGATACTCAAGTTGCAGTAAAATTACTTTCTCAATCATCAGTACAAGGTCATAGAGAATTCCGATCAGAGGTAGAACTTTTGATGGTTGTTCACCATAGACATTTGGTTTCTTTGATTGGATATTGCGAAGAAACTGGTGCAAGGGCATTAGTTTATGAGTATATGGCTAATGGTGACCTCCGGCAACATCTATCAGGTAATAACAAGCATGCTTTGAAATGGAAGAATAGGCTTCAAATTGCACTAGATGCAGCGCGTGGATTAGAATATTTGCATGATGGTTGTAAGCCAGCAATAGTACACAGGGATTTGAAGACCACTAACATTTTGCTAGATGAAAATATGGAAGCTAAAATTGCAGATTTTGGATTATCCAGAGCTTTTGCAAATGATATTGACAGTCATGTCTCAACTCGTCCAGCTGGAACTATTGGTTACCTTGACCCCGATTTTGGGATAATTCTGCTAGAGCTAATCACTGGACAACCAGCAGCAAAAAGGCATCCAAACAATACCGTCAGTCTCCTTCTTCAATGGGTTACCCCTAAAGTTAAAAACAAGGATATCCAGTACATTGTTGATCCAAGGTTCCAAGGAAAATATAATGTCGATTCGGCTTGGAAATTTCTGGAGATAGCCATGTCATGCACTGCACCAACTGCAATTCAGAGGCCAGTCATAAGTCAAGTAGTTTATGAGCTAAGGGAATGTTTGGCAATGGAGATAAGCATGGAAGTGACCAGCAGCGACCACCCCATCAATTCAAGCAGTTCCATGAATACGAGTGCTTTGCAATTTGATTCAGACGTCAGTATATTGTCTGGAAGATAG 2658 0.3995 MERTAQWILWVALIQLLLNLSDAMLSGRKLSATTSNTHSDFISIDCGASEEYTDHQTGISYQTDTGFVDTGDNFMVAPEKRYDIYYPYFGRQLQTLRRFPEGRRNCYTLKPKQGKNQSYLIRAFFSYENYDGRNQTPSFELYLGVNYWKNIYPIKNYHFAEIIHTPMADTIHVCLVKSGKGIPFISTLELRPLNNSIYTTPSPSQSLLELQTRIDVGYVSNTTSLHIRYMDDIYDRTWRMGNTLNLTDWHVFNKSVDIDPQSTNDSYRLPARVLLSAAKSSNRSSALNFDCVSAWGGPFEYSFTYFVYFHFAEIEQLPHGQKRVIDITVNDEKFLPKPITLEYLKPQTVFTVTNQSCLRFSISATSESAAPPILNAFEVYRLISPLTLPTDQRDVDAIWDIKITYKIFKLDWQGDPCISNFAWKGLMCSSLTDHSYARITSLNLSMSQLTGHIVISFSQLLELESLDLSDNKLSGTIPEFLAKLPKLKVLNLRGNKLTGSIPNILKEKSDLEMSLDGNADLCLTDPCKKHKFAIPVIASVSILIVVILVLLGIWFFGIKRLKGDFTRRESSKLRSKAFSYSNVLEITNNLQNLIGEGGFGKVYLGSLKNDTQVAVKLLSQSSVQGHREFRSEVELLMVVHHRHLVSLIGYCEETGARALVYEYMANGDLRQHLSGNNKHALKWKNRLQIALDAARGLEYLHDGCKPAIVHRDLKTTNILLDENMEAKIADFGLSRAFANDIDSHVSTRPAGTIGYLDPDFGIILLELITGQPAAKRHPNNTVSLLLQWVTPKVKNKDIQYIVDPRFQGKYNVDSAWKFLEIAMSCTAPTAIQRPVISQVVYELRECLAMEISMEVTSSDHPINSSSSMNTSALQFDSDVSILSGR 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4353g00006 885 SUPERFAMILY L domain-like 418 511 - -
Pral4353g00006 885 ProSiteProfiles Protein kinase domain profile. 588 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4353g00006 885 FunFam Leucine-rich repeat receptor-like kinase 393 524 - -
Pral4353g00006 885 Gene3D - 209 382 - -
Pral4353g00006 885 PANTHER OS07G0107800 PROTEIN-RELATED 42 852 - -
Pral4353g00006 885 Gene3D Transferase(Phosphotransferase) domain 1 664 863 - -
Pral4353g00006 885 Pfam Leucine rich repeat 438 497 IPR001611 GO:0005515
Pral4353g00006 885 Pfam Protein tyrosine and serine/threonine kinase 590 749 IPR001245 GO:0004672|GO:0006468
Pral4353g00006 885 PRINTS Leucine-rich repeat signature 463 476 - -
Pral4353g00006 885 PRINTS Leucine-rich repeat signature 484 497 - -
Pral4353g00006 885 FunFam Os07g0541700 protein 664 752 - -
Pral4353g00006 885 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Pral4353g00006 885 ProSiteProfiles Leucine-rich repeat profile. 462 485 IPR001611 GO:0005515
Pral4353g00006 885 ProSiteProfiles Leucine-rich repeat profile. 486 508 IPR001611 GO:0005515
Pral4353g00006 885 SMART serkin_6 588 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4353g00006 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Pral4353g00006 885 Gene3D Ribonuclease Inhibitor 402 523 IPR032675 -
Pral4353g00006 885 SUPERFAMILY Protein kinase-like (PK-like) 573 843 IPR011009 -
Pral4353g00006 885 CDD STKc_IRAK 594 843 - -
Pral4353g00006 885 FunFam Leucine-rich repeat receptor-like protein kinase 566 663 - -
Pral4353g00006 885 Gene3D Phosphorylase Kinase; domain 1 570 663 - -
Pral4353g00006 885 Pfam Malectin-like domain 44 381 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4353g00006 Pral-Chr4353 69697 95631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4353g00006 30 871 Receptor kinase-like Gene Family AT2G19230 42.760 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4353g00006 Malectin_like 3.8e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4353g00006 - - pcin:129289896 1106.28