Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4353g00004 ATGGGTGATGAAAATGTTTTTGACCAACCTATAGTTCTTGAATACTTGAAACCACAAACCATTGCTCTAAATGCAAGTCAAGGTTATGTTCGTTTTAACATCAGCGCAACATCAGAATCCGATGCTCCTCCAATTCTTAATGCTTTTGAGGTTTACGAGTTCGTATCACCTCTACATTCCCCAACAGACCAAAGAGACGTGGATGCTATCATAGACACTAAAAAAACATACAAGATCTCCAATTTGGATTGGCAAGGAGATCCATGTGTTGCAAACCTCTCTTGGGAACGACTAAGCTGCAGTTCTGGGATCAATGACAAAAATGCAAGAATCGTCTCAGCGAACCTAAGCGCGGCCAAATTGGCAGGGCAAATAACAACGACATTTTCGCAACTTACAGAGTTAGAGTCCTTGGATTTGTCATTTAATGACTTGTCGGGATCAATACCTGAATTTTTACCTAAACTACCAAAATTGAGAGTCCTTAACTTGACTGGCATCAAACTCACAGGTTCCATTCCCAAGGCTCTTCAGGAAAAGGCAGATTTGCAATTGAGTTTGGAGGATAATCCTGGCCTTTGTCTGGTGGATTCATGCAAAAAGCAGAAGTTTGTCATTCCACTTGTTGCTTCCGTTTCTGCTTTAGTTGCAAGCCTCTTGGTTTGTCTAGGAATATGGACCTTCAAAACCAAAAAACTAAAAGTGGTTATAACTGTTTCTAAGAATGAAGAACCGTTGCAACCAAAAGCTCGAGCAGTTTCTTACTCCAGAATTCTCAGAATCACTAACAATTTGCAAGACTTAATTGGAGAAGGAGGATTTGGAAAGGTTTATTATGGCACTCTAAGAAACGGTACTCAAGTTGCTGTGAAGTTACTTTCTCAATCATCAATGCAAGGGTTCAAAGAATTTCGATCAGAGGTAGAACTCTTGATGATTATTCATCATCGACATTTGGTTTCCCTGATTGGCTACTGTGAAGAAGGTGTTGTGAGGGCATTAATTTATGAATATATGGCTAATGGCAATCTCCAACAGCATTTATTAGGAGAGAACCCTAACGTTTTGAAATGGAATGAGCGTCTTCAAATTGCATTGGATGCTGCACATGGATTGGACTATTTGCATAATGGTTGTAAACCACCAATTGTCCATAGAGATTTAAAAACTTCCAACATTCTGCTAAATGAAAAGATGCAAGCCAAAATTTATGACTTTGGACTATCTCGAGCTTTTGCAACTGATATTGACACTCATGTATCAACTCGTCCGGCTGGCACATTGGGTTATCTTGATCCTGAGTTTCAGAGCTCTGGAAACCTGAATAAAAAGAGTGATGTTTATAGTTTTGGGATAATTCTACTAGAACTAATCACAGGTCAACCAGCAATAAGGAGAGAACATGGCACTGTCTGTCACATTCTCCATTGGGTTACCCCAAAAATTGAAGTGGGGGACATCCAATCCATCATTGATCCAAGATTACGAGAAAATTGCAGCACCAATTCAGCTTGGAAATTGTTAGAGATTGCTCTGTCTTGCACTCCACCATCTGCAATTCAAAGGCCTGACATAAGCCATGTAGTTGCCGAACTAAAGGAATGTTTGGCTCTAACCGAAAGCAAGGGGACAATTTCAACCAGTTCCCTTGATAGGTTTTCTTTCAGTTCTGATTCAGGGCTTGTTCCATATGCTCGGTAG 1701 0.4015 MGDENVFDQPIVLEYLKPQTIALNASQGYVRFNISATSESDAPPILNAFEVYEFVSPLHSPTDQRDVDAIIDTKKTYKISNLDWQGDPCVANLSWERLSCSSGINDKNARIVSANLSAAKLAGQITTTFSQLTELESLDLSFNDLSGSIPEFLPKLPKLRVLNLTGIKLTGSIPKALQEKADLQLSLEDNPGLCLVDSCKKQKFVIPLVASVSALVASLLVCLGIWTFKTKKLKVVITVSKNEEPLQPKARAVSYSRILRITNNLQDLIGEGGFGKVYYGTLRNGTQVAVKLLSQSSMQGFKEFRSEVELLMIIHHRHLVSLIGYCEEGVVRALIYEYMANGNLQQHLLGENPNVLKWNERLQIALDAAHGLDYLHNGCKPPIVHRDLKTSNILLNEKMQAKIYDFGLSRAFATDIDTHVSTRPAGTLGYLDPEFQSSGNLNKKSDVYSFGIILLELITGQPAIRREHGTVCHILHWVTPKIEVGDIQSIIDPRLRENCSTNSAWKLLEIALSCTPPSAIQRPDISHVVAELKECLALTESKGTISTSSLDRFSFSSDSGLVPYAR 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4353g00004 566 Pfam Protein tyrosine and serine/threonine kinase 265 532 IPR001245 GO:0004672|GO:0006468
Pral4353g00004 566 Gene3D Phosphorylase Kinase; domain 1 246 338 - -
Pral4353g00004 566 Gene3D Ribonuclease Inhibitor 67 193 IPR032675 -
Pral4353g00004 566 Gene3D Transferase(Phosphotransferase) domain 1 339 552 - -
Pral4353g00004 566 CDD STKc_IRAK 269 534 - -
Pral4353g00004 566 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 339 544 - -
Pral4353g00004 566 ProSiteProfiles Protein kinase domain profile. 263 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4353g00004 566 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Pral4353g00004 566 SMART serkin_6 263 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4353g00004 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Pral4353g00004 566 SUPERFAMILY L domain-like 79 183 - -
Pral4353g00004 566 FunFam Leucine-rich repeat receptor-like kinase 65 195 - -
Pral4353g00004 566 SUPERFAMILY Protein kinase-like (PK-like) 249 532 IPR011009 -
Pral4353g00004 566 PANTHER OS07G0107800 PROTEIN-RELATED 14 540 - -
Pral4353g00004 566 FunFam Leucine-rich repeat receptor-like protein kinase 240 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4353g00004 Pral-Chr4353 50368 54146 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4353g00004 30 566 Receptor kinase-like Gene Family AT2G19210 47.550 3.55e-167 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4353g00004 PK_Tyr_Ser-Thr 9.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4353g00004 - - pcin:129289896 682.945