Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4353g00003 ATGAGTTTGGAGGATAATCCTGGACTTTGCCTGGTGGATTCATGCAAAAAGCAGAACTTTGTCATTCCACTTGTTGCTTCTGTTTCTGCTTTAGTTGCAAGCCTCTTGGTTTGTCTAGGAATATGGATCTTCAGAATCAAGAAATTGAAAGTGCTTTTCTCTGTTTCTACAAATGAAGAAGCGTTACAACTAAAAACCAAGGCAGTTTCATACTCCATAATACTTAGAATCACTGATAATTTGAAAAACTTAATTGGAGAAGGAGGATTTGGAAAGGTTTATTATGGCACTCTGGAGAATAATGTTCATGTTGCTGTGAAGTTACTTTCTCAATCATCAATGCAAGGTTTCAGAGAATTCCGATCAGAGGTGGAACTCTTAATGGTTATTCATCATAGACACTTGGTTTGTCTGATTGGATACTGTGAAGAAGGCGCTGTGAGGGCATTAATTTATGAATATATGGCTAATGGCAATCTTCAACAACATTTATCAAAAGAGAACCCCAGTGTTTTGAAATGGAATGAGAGGCTTCAAGTTGCATTGGATGCTGCACATGGATTGGATTATTTGCATAATGGTTGCAAGCCACCAGTAGTTCATAGAGACTTAAAGACGTCCAACATTTTACTAGATGAAAACATGCAAGCCAAGATTTCTGACTTTGGATTATCTCGAGCTTTTGCAAATGATGTTGATAGTCATGTAACAACTTGTCCTGCTGGCACACCGGGTTACCTTGATCCTGAATTCCAAAGTTCTGGAAACTTGACCAAAAAGAGTGATGTTTATAGCTTTGGAATAATTTTACTTGAGCTAGTCACAGGTCAACCAGTGCTAAAAAGAGAACTTGGCACAGTTCATTACATTCTTACTTGGGTTACCCCTAAACTTGAAATGGGGGATATCCAATCTATCATAGATCCAAAGTTAGAAGGAAATTACAGCACTAATTCAGCTTGGAAATTATTAGAGATAGCTATGTGTTGCACTTCAGCATCTGGAGTTGAAAGGCCTGACATAAGCCACGTAGTAGCTGAACTAAAGGAGTGTTTGGCTCTGACCAAAAGTATGGGGTGGAATTCAACCATTGATTTGGAAATGGCTTCTGTGGGGTCTGATTCAGGGCTTATTCCTCATGCTCGGTAG 1149 0.389 MSLEDNPGLCLVDSCKKQNFVIPLVASVSALVASLLVCLGIWIFRIKKLKVLFSVSTNEEALQLKTKAVSYSIILRITDNLKNLIGEGGFGKVYYGTLENNVHVAVKLLSQSSMQGFREFRSEVELLMVIHHRHLVCLIGYCEEGAVRALIYEYMANGNLQQHLSKENPSVLKWNERLQVALDAAHGLDYLHNGCKPPVVHRDLKTSNILLDENMQAKISDFGLSRAFANDVDSHVTTCPAGTPGYLDPEFQSSGNLTKKSDVYSFGIILLELVTGQPVLKRELGTVHYILTWVTPKLEMGDIQSIIDPKLEGNYSTNSAWKLLEIAMCCTSASGVERPDISHVVAELKECLALTKSMGWNSTIDLEMASVGSDSGLIPHAR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4353g00003 382 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 155 360 - -
Pral4353g00003 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Pral4353g00003 382 Gene3D Phosphorylase Kinase; domain 1 61 154 - -
Pral4353g00003 382 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Pral4353g00003 382 PANTHER OS07G0107800 PROTEIN-RELATED 7 352 - -
Pral4353g00003 382 SUPERFAMILY Protein kinase-like (PK-like) 66 348 IPR011009 -
Pral4353g00003 382 CDD STKc_IRAK 85 350 - -
Pral4353g00003 382 Gene3D Transferase(Phosphotransferase) domain 1 155 366 - -
Pral4353g00003 382 FunFam receptor-like protein kinase FERONIA 47 154 - -
Pral4353g00003 382 Pfam Protein tyrosine and serine/threonine kinase 81 348 IPR001245 GO:0004672|GO:0006468
Pral4353g00003 382 ProSiteProfiles Protein kinase domain profile. 79 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4353g00003 382 SMART serkin_6 79 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4353g00003 Pral-Chr4353 19096 21502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4353g00003 1 382 Receptor kinase-like Gene Family AT2G19210 47.716 9.27e-121 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4353g00003 PK_Tyr_Ser-Thr 4.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4353g00003 - - pcin:129289894 481.1