Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4352g00003 AGAGCACAAGATTCCAGTTATAAGCTGTCATCAGAATTATTAAGCACAGCAGCACAGCCGCGTAATAGTTCCATCCCCTTAGCATTGAATTGGATTTATGATGCATCTTTCCAATATTACGTGCTCCTCCACTTCGCCGAAATTCAAAAGCTTCCCCCTCATCACAGAAGAATTATCAATGTCACTTTTGATGATATAAACTTCATCTCTCAGCCTCTTGAATACTTGAAGCCTGTCACTCTAAGTTCCAAGATGGCAAGTAATAACGGTAATGTCCGTTTCACAATCAGGGCAGCTTCTGAATCTGACGCTCCTCCCATCCTCAATGCCTTTGAAATATACAGATACACCCCACTGCCAAATTCACCAACAAATGCAGAAGATGTTAATGCTATCATGGAAATCAAACGTACATATGGAATTTCTAGAATCACTTGGCAAGGTGACCCATGTATTCCATCTAACTTACGATGGGAAGGTTTGGGTTGCAGTGCTGACAACAATTCAAGGATCATTTCATTGAACCTAAGCTTAAGCAAATTGACAGGACAGATAGCTCCTTCATTTGCCAATCTGCAGAACTTGGAGTCCTTAGATTTGTCAAATAATGAATTGATCGGACAACTGCCAGAATTTCTTGCTGATCTTCCTAATTTGAAAGTCCTTAATTTGACTGGAAACAAGCTCACAGGTTCAATTCCAAAGGCTTTGAGGGAAAAGGCTGATCTGCAGCTAAGTGTATCCAGCAATCCAGGCCTCTGTCAGAAAAATTCATGCAAAGAACACAAGTTTGTAATTCCTCTTATTGCATCAATTGCAGTTTTGGTCCTAATTATCATTCTTTCTTTGATAATTTGGAGACTCAGAAAGAAAAGACAAGTTTTGTCAATCAAATCCCAAAAGATGGGAATTCTAAAACAAAGGAGTCGAGAATTTTCTTACTTACAAGTTCTCCGCATCACCAACAATTTCAAAACTATCATCGGAGGAGGAGGATTTGGGAAAGTTTATCTTGGCACTTTAGAAGATGATACTCAAGTTGCAGTAAAATTACTTTCTCCATCATCAAAGCAAGGGTACAAGGAATTTGAATCAGAGGTTCAACTCTTAGCGGTTATTCATCACAGAAATTTGGTTTCGCTTGTTGGATATTGTCATGAAAATGACATAAAAGCATTGATTTATGAATACATGGATAATGGGGACCTCGGCCAACTATTATCGGAGAAAAACTCAAATGTTTTGAAGTGGAATGAGAGACTTCAAGTCGCAAATGATGCAGCAAAAGGATTGGAATATCTTCATAATGGTTGTAAGAATCCTATAATTCATAGAGACTTGAAGCCATCCAACATTTTATTGAACAAATATAAGCTAGCCAAGATTGCTGATTTTGGACTGTCTAGAGCATTCACAAATGAAACAGACTCACATCTATCAACTCAACCTGCTGGTACACCTGGTTACATTGATCCAGAATTTCAGAGATCTGGAAACCTAAATAAGAAAAGTGATATTTATAGTTTTGGGATGATTCTCCTTCAACTGATAACTGGTCATCCTCCAATAGAGAAAGGACCTGAGAATGTTAGTTTCATTCTTGATTGGGTTCATCCGAAAATTGAATGTGGGGATATTGAGGGCATTGTTGATCCAACATTAGCTGGAGAATTTGGTGTTACATCAGCATGGAAAGCTGTTGAAGTAGCCATGGCATGTATCTTACCAACTCCAACCCTAAGGCCAGAAATAAGTTACGTATTGCAAGAACTACAAGAATGTTTAGCTATGGAGATGGACCATCCAAGGACGAATAGCACCACAAGTGATTCCCTCCATTATACTGTGAACTGTGAATCAGTGACTACTCTCTCTGCTAGGTAG 1884 0.3875 RAQDSSYKLSSELLSTAAQPRNSSIPLALNWIYDASFQYYVLLHFAEIQKLPPHHRRIINVTFDDINFISQPLEYLKPVTLSSKMASNNGNVRFTIRAASESDAPPILNAFEIYRYTPLPNSPTNAEDVNAIMEIKRTYGISRITWQGDPCIPSNLRWEGLGCSADNNSRIISLNLSLSKLTGQIAPSFANLQNLESLDLSNNELIGQLPEFLADLPNLKVLNLTGNKLTGSIPKALREKADLQLSVSSNPGLCQKNSCKEHKFVIPLIASIAVLVLIIILSLIIWRLRKKRQVLSIKSQKMGILKQRSREFSYLQVLRITNNFKTIIGGGGFGKVYLGTLEDDTQVAVKLLSPSSKQGYKEFESEVQLLAVIHHRNLVSLVGYCHENDIKALIYEYMDNGDLGQLLSEKNSNVLKWNERLQVANDAAKGLEYLHNGCKNPIIHRDLKPSNILLNKYKLAKIADFGLSRAFTNETDSHLSTQPAGTPGYIDPEFQRSGNLNKKSDIYSFGMILLQLITGHPPIEKGPENVSFILDWVHPKIECGDIEGIVDPTLAGEFGVTSAWKAVEVAMACILPTPTLRPEISYVLQELQECLAMEMDHPRTNSTTSDSLHYTVNCESVTTLSAR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4352g00003 627 PANTHER OS07G0107800 PROTEIN-RELATED 8 598 - -
Pral4352g00003 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Pral4352g00003 627 SMART serkin_6 322 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4352g00003 627 Pfam Protein kinase domain 325 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4352g00003 627 ProSiteProfiles Protein kinase domain profile. 322 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4352g00003 627 Pfam Leucine rich repeat 173 229 IPR001611 GO:0005515
Pral4352g00003 627 Gene3D Ribonuclease Inhibitor 129 254 IPR032675 -
Pral4352g00003 627 SUPERFAMILY L domain-like 152 244 - -
Pral4352g00003 627 Gene3D Phosphorylase Kinase; domain 1 303 397 - -
Pral4352g00003 627 CDD STKc_IRAK 328 593 - -
Pral4352g00003 627 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Pral4352g00003 627 Gene3D Transferase(Phosphotransferase) domain 1 398 617 - -
Pral4352g00003 627 FunFam Leucine-rich repeat receptor-like kinase 127 256 - -
Pral4352g00003 627 ProSiteProfiles Leucine-rich repeat profile. 194 217 IPR001611 GO:0005515
Pral4352g00003 627 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 398 605 - -
Pral4352g00003 627 Pfam Malectin-like domain 4 115 IPR024788 -
Pral4352g00003 627 PRINTS Leucine-rich repeat signature 216 229 - -
Pral4352g00003 627 PRINTS Leucine-rich repeat signature 195 208 - -
Pral4352g00003 627 FunFam Leucine-rich repeat receptor-like protein kinase 299 397 - -
Pral4352g00003 627 SUPERFAMILY Protein kinase-like (PK-like) 304 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4352g00003 Pral-Chr4352 25171 28611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4352g00003 11 610 Receptor kinase-like Gene Family AT2G19230 46.353 1.69e-172 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4352g00003 Pkinase 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4352g00003 - - pcin:129289942 789.645