Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral4351g00012 | ATGGGGAAGGCTTCTAGGTGGTTGAAGGGCTTGCTGGGGATGAAGAAAGAGAAGGACCACCGCATGGACAATTCTGGCTCATTGGTTTCTGACAAGAAGGAAAAGAAACGATGGAGTTTTGCCAAGTCAGGCAAAGATTCCGATTCTGGAACCAGTCAACCTCGTTTTCCATCTCCTGATTCCGCTCGGTATAAATCCTACATGTCGGAAACAGAGAAAGAGCAGAACAAGCACGCAATTGCGGTGGCCGCTGCAACGGCCGCTGCAGCCGATGCTGCTGTCGCCGCCGCTCAGGCTGCCGTTGCGGTGGTAAGGCTCACCAGCCACGGCAGAGGGACTCTGTTTAGTGGGAGTAGAGAAAAATGGGCTGCGGTTAAGATTCAAACCTTTTTCAGAGGCTATTTGGCGAGGAAGGCTCTAAGAGCTTTGAAAGGATTGGTTAAGATTCAAGCGCTTGTTCGCGGTTATCTTGTTCGAAAGCGAGCTACTGCAACTCTATACAGCATGCAAGCTCTGATCAGAGCTCAAACTGCAGTTCGATCACAGAGAGCTCGTCGTTCCATTAGCAAAGGAAATCGACACCAGTCCGAGTTCCGAGCTAGAAAATCAATGGATCGATTTGATGAAACGAGAAGTGAAATCCACAGTAAAAGGTTATCCACATCATATGAACAATCCTTCAATGGGTATGACGACAGTCCCAAAATTGTCGAGATTGATACGTACAGGACTCAGTCGAGGTCTCGGAGAATTGCGACGACGTTTTCAGAATGTGGAGACGAAACACCTTATCAAACGACGCCGTTTTCCGACAGTAAGCATCATGAAGAGTTCCAGTGGTGCTTTGCCGGCGATGAGTGCAAATTCCCTACGGCTCAGAGCACTCCCCGGTTTGCAGTCAGCGCGCGTTCTCACAACGCGCCTCCGACTCCGGCAAAGAGTGTCTGCGGCGACACATTTTGCCGGCCGTACTATAATTTCCCGAACTACATGGCGAATACGCAGTCGTTTAAGGCGAAACTGAGGTCTCATAGTGCTCCGAAACAGAGACCAGAGCCGAAGAAGAGGCTCTCGCTGGATGAAATAATGGCGGCCAGAAACAGCATAAGCAGTGTTAGAATGCAGAGGTCGTCTTGTTCGGTTCAAGAAGAGTCGTGGAATTTCTGA | 1167 | 0.4979 | MGKASRWLKGLLGMKKEKDHRMDNSGSLVSDKKEKKRWSFAKSGKDSDSGTSQPRFPSPDSARYKSYMSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTLFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRATATLYSMQALIRAQTAVRSQRARRSISKGNRHQSEFRARKSMDRFDETRSEIHSKRLSTSYEQSFNGYDDSPKIVEIDTYRTQSRSRRIATTFSECGDETPYQTTPFSDSKHHEEFQWCFAGDECKFPTAQSTPRFAVSARSHNAPPTPAKSVCGDTFCRPYYNFPNYMANTQSFKAKLRSHSAPKQRPEPKKRLSLDEIMAARNSISSVRMQRSSCSVQEESWNF | 388 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral4351g00012 | 388 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
| Pral4351g00012 | 388 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 360 | - | - | |
| Pral4351g00012 | 388 | MobiDBLite | consensus disorder prediction | 10 | 43 | - | - | |
| Pral4351g00012 | 388 | MobiDBLite | consensus disorder prediction | 190 | 215 | - | - | |
| Pral4351g00012 | 388 | ProSiteProfiles | IQ motif profile. | 120 | 148 | IPR000048 | GO:0005515 | |
| Pral4351g00012 | 388 | ProSiteProfiles | IQ motif profile. | 144 | 171 | IPR000048 | GO:0005515 | |
| Pral4351g00012 | 388 | Gene3D | - | 100 | 145 | - | - | |
| Pral4351g00012 | 388 | MobiDBLite | consensus disorder prediction | 44 | 59 | - | - | |
| Pral4351g00012 | 388 | MobiDBLite | consensus disorder prediction | 183 | 215 | - | - | |
| Pral4351g00012 | 388 | SMART | iq_5 | 142 | 163 | IPR000048 | GO:0005515 | |
| Pral4351g00012 | 388 | SMART | iq_5 | 119 | 141 | IPR000048 | GO:0005515 | |
| Pral4351g00012 | 388 | Pfam | IQ calmodulin-binding motif | 122 | 141 | IPR000048 | GO:0005515 | |
| Pral4351g00012 | 388 | Pfam | IQ calmodulin-binding motif | 147 | 161 | IPR000048 | GO:0005515 | |
| Pral4351g00012 | 388 | Pfam | Protein of unknown function (DUF4005) | 296 | 375 | IPR025064 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral4351g00012 | Pral-Chr4351 | 140569 | 143745 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral4351g00012 | 1 | 374 | IQD Protein Family | AT3G16490 | 58.031 | 1.74e-121 | 355 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral4351g00012 | - | - | gmx:100797686 | 505.368 |