Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4351g00010 ATGAATGGTAGGTCAAGAAACGAGGAGGTGTCTCCTCAGCTGCTGGATTTGATCCCAACCGACCGAGAGTGGCATGAAAACAGAGACGAAGAAAGAAGCCACCGCAAGTCTTCAGAAGAGAGGAAACTTGAGCTTAGACTTGCTCCACCCGGTGAAGAAGACGACGTGGCCAGAGGAAGAGACGAATCTCTGCTCTCTCTTGGCTACTTCTCAGCTCCCATTAATGGAGGCCGCGCCCAGAAAACTGCGTCTTCTCCTTGGGCTTCTTCTGCGGGCTTCCAGGAAAAGAAGACTCAGACCATTAATCAACACAGGGGGGTTTCATCATCATTCCTACAGTCTCAACCCTCTCCTGCAAATACAGCTGTACCCAACAGCTCTCAGAAAAGAACTGCTCCTGGTCCAGTAGTGGGGTGGCCTCCGATTCGTTCATTTAGGAAGAACCTTGCAAGCAGCAGTTCTTCTAAAGTTGCCCCTCAACACGAATCTCAGAATCAGCATGTGGTTGAAGATAAGGTTGCTGGGAAGAAACCTGTGGCTGACAACAACGTTGTTGGTGGTAAAGGCCTATTTGTGAAAATCAATATGGATGGAGTTCCCATAGGCAGAAAAGTGGACCTTAATGCTTACGATAGCTATGAAAAACTCTCCTCTGCTGTTGACGAGCTCTTTAGAGGCCTCCTTGCTGCTCAAAGAGATTCTCGTGGTGGTGGTGGTGGTGGGATTCAGAACAAGCAAGAGGAAGAGAAAGCTATTACAGGTTTATTGGACGGAAGTGGAGAATACACTCTGGTTTATGAGGATAACGAAGGAGACAGGATGCTTGTTGGGGATGTGCCGTGGCACATGTTCGTGTCAACAGTGAAGAGGCTTCGTGTTCTGAAGAGTTCTGAGCTCTCTGCTTTTACCCTTGGTGGGAAGCAAGGCAAAACTGCCTCTTGA 942 0.4862 MNGRSRNEEVSPQLLDLIPTDREWHENRDEERSHRKSSEERKLELRLAPPGEEDDVARGRDESLLSLGYFSAPINGGRAQKTASSPWASSAGFQEKKTQTINQHRGVSSSFLQSQPSPANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSSSKVAPQHESQNQHVVEDKVAGKKPVADNNVVGGKGLFVKINMDGVPIGRKVDLNAYDSYEKLSSAVDELFRGLLAAQRDSRGGGGGGIQNKQEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGGKQGKTAS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4351g00010 313 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 40 299 IPR003311 GO:0005634|GO:0006355
Pral4351g00010 313 FunFam Auxin-responsive protein 185 308 - -
Pral4351g00010 313 ProSiteProfiles PB1 domain profile. 189 296 IPR000270 GO:0005515
Pral4351g00010 313 MobiDBLite consensus disorder prediction 1 59 - -
Pral4351g00010 313 MobiDBLite consensus disorder prediction 73 172 - -
Pral4351g00010 313 Pfam AUX/IAA family 43 301 IPR033389 -
Pral4351g00010 313 Gene3D - 185 307 - -
Pral4351g00010 313 MobiDBLite consensus disorder prediction 77 132 - -
Pral4351g00010 313 MobiDBLite consensus disorder prediction 146 164 - -
Pral4351g00010 313 MobiDBLite consensus disorder prediction 19 59 - -
Pral4351g00010 313 SUPERFAMILY CAD & PB1 domains 187 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4351g00010 Pral-Chr4351 124115 127832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4351g00010 193 307 B3 DNA Binding Superfamily AT4G23980 33.043 8.67e-14 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral4351g00010 AUX_IAA 4.6e-69 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4351g00010 K14484 - gmx:100804593 365.54