Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4351g00005 ATGACGAGGCGGTGCTCTCACTGTAGCAATAACGGGCACAACTCCCGAACCTGCCCGTCCCGTGGTGGAGGTGCCGGCGGTGGAAGCGCTGGAGGTGTCAAGCTTTTCGGTGTTAGACTTACCGATGGATCAATCATTAAAAAGAGCGCGAGCATGGGGAATCTCTCCGCCCATTACTATTCTTCGTCCTCCGCTGCTGGGTCACCGAATCCCGGGTCGCCTTGCTCGGACCCGCTCCGAGACCTGGGTCATGAGCAAGACGGGTGCTTGTCTGATGACCCCTCTCATGCCACCAGTTCTGCCAACAGTCGGGGAGAAAGAAAGAAAGGGGTTCCATGGACTGAAGAAGAACACAAGATGTTTTTAGTTGGCCTCCAGAAGCTGGGCAAAGGAGATTGGCGAGGCATATCTCGCAATTTTGTTGTGTCAAGGACTCCTACTCAAGTAGCAAGTCATGCCCAAAAGTATTTCATCCGGCAAAGTAATGCTACCCGGAGAAAGAGGCGTGCCAGTCTTTTTGACATGGCTCCAGATGTGTCTTCAGATCCACCTTCAGTCCTGGAAGAACAAGTATTACTGCCACCTTCTGAGAACTCACAACCTGGGAGTGCAAATTTACAACCATCATTAGATCTCTCCCTCAAGTCAGAATTTGAACCCATGGAAACTAATCACGAAGAAAATCTGGAAGAACCCGATGAAACTATGGTAAGATCAAGTGGAGTGACACCAGTGGCTAACGGATTCATGCCGTCATATGTACCTGTTGCATTTTCCTTATGGCCATCAAATGCAGCTCCCCTTGAAGAAGTTAAGGAAGCTGAGACAGCTCATCATCAGGTCCTTAAGCCAATCCCAGTCATTCCCAAGGAACCAGTCAATGTTGATGAACTTGTTGGCATGTCTCAGCTGAGTTTGGGGGAAACTCAAAATGGTGGTAGAGAGCCTTCCCCACTTTCTTTGAAGTTGCTGGGGGAGCCCTCTAGGCAATCAGCATTCCATGCAAATGCTCCAGTTGGTGGTTCAGATCTAAACAATGGCAAGAACAGTGCAATTCAAGCAGCTTAA 1068 0.4944 MTRRCSHCSNNGHNSRTCPSRGGGAGGGSAGGVKLFGVRLTDGSIIKKSASMGNLSAHYYSSSSAAGSPNPGSPCSDPLRDLGHEQDGCLSDDPSHATSSANSRGERKKGVPWTEEEHKMFLVGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNATRRKRRASLFDMAPDVSSDPPSVLEEQVLLPPSENSQPGSANLQPSLDLSLKSEFEPMETNHEENLEEPDETMVRSSGVTPVANGFMPSYVPVAFSLWPSNAAPLEEVKEAETAHHQVLKPIPVIPKEPVNVDELVGMSQLSLGETQNGGREPSPLSLKLLGEPSRQSAFHANAPVGGSDLNNGKNSAIQAA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4351g00005 355 Gene3D - 113 162 - -
Pral4351g00005 355 ProSiteProfiles Myb-like domain profile. 105 157 IPR001005 -
Pral4351g00005 355 FunFam transcription factor MYB1R1 111 162 - -
Pral4351g00005 355 NCBIfam myb-like DNA-binding domain, SHAQKYF class 108 160 IPR006447 GO:0003677
Pral4351g00005 355 MobiDBLite consensus disorder prediction 60 112 - -
Pral4351g00005 355 Pfam Myb-like DNA-binding domain 112 157 IPR001005 -
Pral4351g00005 355 SMART sant 109 159 IPR001005 -
Pral4351g00005 355 MobiDBLite consensus disorder prediction 1 26 - -
Pral4351g00005 355 MobiDBLite consensus disorder prediction 306 355 - -
Pral4351g00005 355 PANTHER TRANSCRIPTION FACTOR KUA1 3 283 - -
Pral4351g00005 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 161 IPR017930 -
Pral4351g00005 355 MobiDBLite consensus disorder prediction 1 18 - -
Pral4351g00005 355 CDD SANT 112 157 IPR001005 -
Pral4351g00005 355 SUPERFAMILY Homeodomain-like 107 162 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4351g00005 Pral-Chr4351 68342 72301 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4351g00005 Myb_DNA-binding 3.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4351g00005 - - qsa:O6P43_027717 531.946