Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00112 ATGTTAATGGAAGTACCGGAGTGTTTTGTCGGTGGCTATTTCTCAGCCGGAGGAGATCAATTCTCCCCGGACAAGCGCCATGGTGCTGACCAGAAGGCCGGTGAGCCCTTCGCCATTGACGACCTCCTTGACCTCTCCAACGCGGATGCTATGATCATGTCCGACGGTTTCTTCGATAATGCCGCCGGCAACTCCACTGACTCATCCACTGTCACCGCCGTTGACAGCTGTAATTCTTCCGTCTCCGGTGGTGACAATCATTTCTCCTCCGGTTACGCTGGCTCCCGCGGCTTCGGCGATCCTCAATTATCTGGAGAACTCTTCGTTCCGGATGACGACTTGGCTGAACTGGAGTGGCTATCGAACTTCGTGGAAGACTCGTTTTCTGTCGAAGATGAGCTAAAAACACTCCACCTCCTCTCCGGAACCACTGCTTCCGCCATCGGCACGAAACCTCAGACACCAGATTCCTCCTCTTCCTCCGAAACAATTCCACCATTCGCTGCGGACACCGATCGAAACGCACCGCTCTTCCATCCAGAAACTCCGCTTCCAGGTAAAGCTCGGAGCAAGCGTACACGTGCTGCCCCCGGGGATTGGTCTACCCGCCTCCTCCACCTGATCACCCCGACGGTGGTTTCAGAACCGGCGCAAGCGAAGGCGGTGGCAACTAAGAAAAGGGAGAGTTCGAATTCGGAGTCCTCTTCGGGTCGGAGATGCCTGCATTGCGCTGCCGACAAGACTCCACAGTGGCGGACCGGACCAATGGGTCCGAAGACGCTGTGCAATGCTTGTGGAGTGCGGTACAAGTCCGGGAGGCTGGTGCCAGAGTACCGACCTGCGGCGAGCCCGACGTTCGTGTCATCAAAGCACTCCAATTCGCATAGGAAGGTGATGGAGATGAGGAGGCAGAAGGAAATGCAGAGGCAGCAACAGCACCAATTGGTTAGCCAGAGCTCAATTTTCGGCGTTTCTCATGGGGGAGATGAGTTCTTGATCCCTCATCCCACTGGTCCAGATTATAGGCACATGATCTAG 1038 0.5568 MLMEVPECFVGGYFSAGGDQFSPDKRHGADQKAGEPFAIDDLLDLSNADAMIMSDGFFDNAAGNSTDSSTVTAVDSCNSSVSGGDNHFSSGYAGSRGFGDPQLSGELFVPDDDLAELEWLSNFVEDSFSVEDELKTLHLLSGTTASAIGTKPQTPDSSSSSETIPPFAADTDRNAPLFHPETPLPGKARSKRTRAAPGDWSTRLLHLITPTVVSEPAQAKAVATKKRESSNSESSSGRRCLHCAADKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSSKHSNSHRKVMEMRRQKEMQRQQQHQLVSQSSIFGVSHGGDEFLIPHPTGPDYRHMI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00112 345 MobiDBLite consensus disorder prediction 146 197 - -
Pral4350g00112 345 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 236 298 - -
Pral4350g00112 345 ProSitePatterns GATA-type zinc finger domain. 240 265 IPR000679 GO:0006355|GO:0043565
Pral4350g00112 345 CDD ZnF_GATA 239 286 IPR000679 GO:0006355|GO:0043565
Pral4350g00112 345 FunFam GATA transcription factor 229 315 - -
Pral4350g00112 345 Pfam GATA zinc finger 240 273 IPR000679 GO:0006355|GO:0043565
Pral4350g00112 345 PIRSF Txn_fac_GATA_plant 22 326 IPR016679 GO:0003677|GO:0005634|GO:0045893
Pral4350g00112 345 MobiDBLite consensus disorder prediction 146 167 - -
Pral4350g00112 345 PANTHER GATA TRANSCRIPTION FACTOR 32 312 - -
Pral4350g00112 345 SMART GATA_3 234 284 IPR000679 GO:0006355|GO:0043565
Pral4350g00112 345 MobiDBLite consensus disorder prediction 216 237 - -
Pral4350g00112 345 Gene3D - 234 319 IPR013088 GO:0006355|GO:0008270
Pral4350g00112 345 ProSiteProfiles GATA-type zinc finger domain profile. 234 270 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00112 Pral-Chr4350 678897 680610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00112 33 345 C2C2-Gata Transcription Factor Family AT4G32890 46.749 5.48e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral4350g00112 GATA 8.5e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00112 - - gmx:100776605 464.536