Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00109 ATGACCCTACTCCCCACTGAGTCCGCTGTTTCCTCTGAAACTTCATCTTCCTCCTCTGATTCCAAATCCCACACCACCAGACCCTCCAAAAGACCCCGCCCCTCTCCTTCTCCTTCCTCCTCCTCCTCTTCTTCTTCGTCTTCGTCTCCTTCTTCTTCAAATAATACTACTTCCGGCAAGCTCCCGCACTACCATGGCGTCAGAATGCGAAGCTGGGGCAAATGGGTGTCTGAGATTCGCGAGCCCCGCAAGAAGTCTCGCATCTGGCTCGGCACTTTCGCCACTCCAGAAATGGCCGCTCGAGCCCACGACGTGGCTGCTCTCTCCATCAAAGGTAAGTCTGCCATTCTCAACTTCCCTCAAATTGCCACCGTCCTTCCCCGGCCCGCCACGCCCTCCCCTCGTGACGTCCAAGCCGCAGCTTCTGCCGCCGCTGCCATGGTCGAGTTCGACTCGGTACAGCCCTCGGAAGCGTCGAGGTCGGAGTCGGAGTCAACGGAGTCTTCAGAGCTGAGTGAGATAGTGGAATTGCCGAACATAGAAGAAGAGAGCTTCCACTCAGACGAGTCAATGACCGAGTTCATATGGATAGATTCAGTGGACCGTTGGGTGTTTCCGGGTATGGGTATGGGTTTGGATGATTCAGAACTGAGCTCCATTTTCTCGCAGCAATTCTCAGAGGAGATCCCACTCTGGGATTAA 702 0.5499 MTLLPTESAVSSETSSSSSDSKSHTTRPSKRPRPSPSPSSSSSSSSSSSPSSSNNTTSGKLPHYHGVRMRSWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGKSAILNFPQIATVLPRPATPSPRDVQAAASAAAAMVEFDSVQPSEASRSESESTESSELSEIVELPNIEEESFHSDESMTEFIWIDSVDRWVFPGMGMGLDDSELSSIFSQQFSEEIPLWD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00109 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 41 187 - -
Pral4350g00109 233 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Pral4350g00109 233 FunFam Ethylene-responsive transcription factor 2 63 121 - -
Pral4350g00109 233 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Pral4350g00109 233 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Pral4350g00109 233 MobiDBLite consensus disorder prediction 36 61 - -
Pral4350g00109 233 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Pral4350g00109 233 MobiDBLite consensus disorder prediction 1 65 - -
Pral4350g00109 233 MobiDBLite consensus disorder prediction 152 173 - -
Pral4350g00109 233 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Pral4350g00109 233 MobiDBLite consensus disorder prediction 1 23 - -
Pral4350g00109 233 Gene3D AP2/ERF domain 63 122 IPR036955 GO:0003700|GO:0006355
Pral4350g00109 233 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Pral4350g00109 233 SUPERFAMILY DNA-binding domain 63 120 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00109 Pral-Chr4350 647651 648433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00109 40 206 AP2-EREBP Transcription Factor Family AT5G11590 51.630 3.28e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4350g00109 AP2 2.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00109 - K09286 pcin:129291592 262.307