Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00098 ATGATCATGGCCGGAAACCCTAACTGGTGGAGCATGCATCCACCAACTTTGATCCCTCCTCAGTATGTGCTTGGATCTTCCTCAATTCCCATGAATTTCTTCACTGAAACCCAAGAAACTCCTCAGTCATGGAGCCAGATGCTTTTTGCTGGTTTACCTGGAGAAGAAGAGAGAATGGGGTCGAATCATCTTCAAGGCAAGAAGATGGAAAATTGGGAAGACCAGATTCTGAATAACGCATCCTCCAGAGCAGCTCCATCACCTCCTCTTGCTGTTGATGTAATAAAGCAAGAGGTTTCCCAAGGTGGTAACTTGTACGGCCATGGAAGTGAGGAGTTTCAGGCTTCAGCAGGATCTTCTCATGCCTCGTCCTCTTCTTATTGGCTAAGCAATATGATGCCCCCATCACTTATTCCTTCTAATTCTTCCCCTAAACCTCGTCAAATCACTACCTCAAGTAACAACACTGATAATATTTTGGATTTCACTTATAACAAGCCACATCATAACAATAATCAACCATCTGAGAGCAATAATAATAGCTCAGTGGCTTCTGGAGTTTGTAATAAGAAGGCTAGGGTTCAGGCATCTCCAAGCCAACCTCCCCTCAAGGTGAGAAAGGAGAAACTAGGCGATAGAATAACAGCACTTCACCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATTAGATTCCTCCAAGGTCAAATTGAGGCACTAAGCTCGCCTTACTTGTCGAATGCATCGAAGAACATTAGGAATCAACACTCTGTACATGGAGAAAGGAATTCTGTGTTTCCTGAGGACCCGGGTCAGCTGTTGAATGACACTGGCCTCAAAAGAAAAGGAGCTTCAAACCAGGAAGGAGAAGAAAAGGCGAAGGACTTGAGGAGTAGAGGGCTGTGCTTGGTACCTGTGTCTTGCACCCAACATGTTGGCAATGAAAATGGAGCTGATTACTGGGCACCTGCTTATGCCAGCGGTTTTTAA 1020 0.448 MIMAGNPNWWSMHPPTLIPPQYVLGSSSIPMNFFTETQETPQSWSQMLFAGLPGEEERMGSNHLQGKKMENWEDQILNNASSRAAPSPPLAVDVIKQEVSQGGNLYGHGSEEFQASAGSSHASSSSYWLSNMMPPSLIPSNSSPKPRQITTSSNNTDNILDFTYNKPHHNNNQPSESNNNSSVASGVCNKKARVQASPSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLSNASKNIRNQHSVHGERNSVFPEDPGQLLNDTGLKRKGASNQEGEEKAKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYASGF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00098 339 FunFam Transcription factor bHLH123 family 204 267 - -
Pral4350g00098 339 MobiDBLite consensus disorder prediction 138 205 - -
Pral4350g00098 339 MobiDBLite consensus disorder prediction 269 303 - -
Pral4350g00098 339 MobiDBLite consensus disorder prediction 138 196 - -
Pral4350g00098 339 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 71 321 - -
Pral4350g00098 339 CDD bHLH_AtbHLH_like 204 251 IPR045239 -
Pral4350g00098 339 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 194 243 IPR011598 GO:0046983
Pral4350g00098 339 Gene3D - 204 268 IPR036638 GO:0046983
Pral4350g00098 339 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 204 256 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00098 Pral-Chr4350 585007 589569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00098 54 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.358 2.51e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00098 - - qsa:O6P43_027744 424.476