Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00071 ATGGAGTCACATCTTCTTGACGATTCACGCATATATGAGTGTAAAATCCATTCATGGGGCGAAGCTCCTTATTATATCAAGTTCGATTTTTTAGATGGGAATCCAGCACTTCCTCCCTCTGGTAGATGCTTCAATATCAGAACTTTTTTAGAAGAACGCTATTACAGCCATGCTTCAAACATGCATCTTACTAGTGCAGCACATACCCATGCTGCTAGATATGATTTTTTCAACATCTCAATCAAGTCAATAAAGCAAGCCACAAATTACATTCTTTCTATTCTTAATGTTCCTGAAAAAAATCAGAAATCTATGGCACAACAGATTTTAAATTTCGTAGAAAACATGGCAAACAACACACACCCAAGTTTTCGTATGATGTTTATGATTGTGATGGTGAATGCTGACATTTTTTACCACAACAATGACAACTGCGATCAAGCTACAGAAATATCTATGAAAGATCAGCTTTGCTTGGCAAAGCTTGCAAGTGAAGCATCCAACAATAAATTGAAGGGAGTGAAGCTTCAACAAGAAGAAGGGTTGGATGCTTGTCCAATTTGTTTAGAAGATTTCAGGATTGATGCAGTTCAAATGCCTTGTTCCCATTTTTTTCATGGAAATTGCATTGTTAACTGGTTGTTGAAGAAGAATAATTGCCCTATATGTCGCTTGGCAATTCCATCAAGTGGTGAACTTCCTTGA 705 0.3702 MESHLLDDSRIYECKIHSWGEAPYYIKFDFLDGNPALPPSGRCFNIRTFLEERYYSHASNMHLTSAAHTHAARYDFFNISIKSIKQATNYILSILNVPEKNQKSMAQQILNFVENMANNTHPSFRMMFMIVMVNADIFYHNNDNCDQATEISMKDQLCLAKLASEASNNKLKGVKLQQEEGLDACPICLEDFRIDAVQMPCSHFFHGNCIVNWLLKKNNCPICRLAIPSSGELP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00071 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 231 IPR013083 -
Pral4350g00071 234 ProSiteProfiles Zinc finger RING-type profile. 185 224 IPR001841 -
Pral4350g00071 234 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 101 226 - -
Pral4350g00071 234 CDD RING-H2_PA-TM-RING 185 224 - -
Pral4350g00071 234 SMART ring_2 185 223 IPR001841 -
Pral4350g00071 234 Pfam Ring finger domain 184 224 IPR001841 -
Pral4350g00071 234 SUPERFAMILY RING/U-box 184 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00071 Pral-Chr4350 443199 443903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00071 163 227 C3H Transcription Factor Family AT3G58720 44.776 3.74e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00071 - K22378 pcin:129316560 108.612