Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00068 ATGGCCAAAAGTTTTACATCTCTCCTTCCTTTGCTGCTTCTCATCCAAATTTGCTCCTCCAAATCCGATGGCATCGCCGTTTACTGGGGTCAGAACGCTGATGAAGGCAATCTTAGAGAAACATGTGCAGTAGGAATATACTCTTTTGTACTGATTGGCTTCCTTACGGTGTTTGGGAATGGCAAAACCCCTCAACTCAACCTCGCAGGTCACTGTGACCCTTCTTCATCATCTGGGTGCACCAGCATTGGCACGGAGATCAAATATTGTCAACGGCAAGGGGTCAAGGTAATGCTCTCTCTTGGAGGAGGATCTGCGGGTTATTCTTTATCTTCCTCAAAGGATGCTCAAAATGTTTCTGATTACCTATGGAACAATTTCTTAGGCGGAAGCTCATCTTCACGTCCACTTGGAGATGCCACATTGGATGGCATTGATTTTGACATAGAGAATTCGGGGGAATACTGGGAGGACCTTGCAATTTACCTCAACTCACATGGCACTGATAGCCAGAAAGTGTACTTATCTGCAGCACCTCAATGCCTATTTCCTGATGCTCATCTTGGCACTGCCATTGATAAAGGCGTTTTTGACTATGTCTGGGTAAAATTCTATGACAATTCTCCCTGCCACTACTCAGAAGCTAATACCAATGCGTTTTTCAATGCATGGAACCAGTGGGCGACATCACTAAATGGGTCAAAAATATTCCTGGGTTTGCCAGCATCTCCGGAAGCAGAGGCAGGTGGCTATGTTCCTCCTGATTTGTTAAACTCTAAGGTACTTCCCACTGTAAAGAAGTCACCTAACTATGGAGGTGTGATGTTGTGCTCGAGGTACTCAGATAGATTGAACGGATATAGCAATGCAATGATTTCCATGGTGTACGGCAAAGCCAAAAGAAACAAGAAACATGGGATGGAAAGGAATGAGGTTGAAATTTTCAGTTTTGAGTGCATCGTGGTTGCCACAAACAATTTCTCAGATTCCAACAAGCTAGGAGAGGGCGGTTTTGGTCATGTATATAAGGGGACACTAATCGATGGGCAGGAAGTTGCAATAAAACGACTATCTAAAAGTTCTGGACAAGGAGTTACAGAATTCAAAAATGAGGCTAAACTTATGGCTAAACTGCAGCACACTAACCTTGTGAGGCTTTTGGGGCTCTGCATCGAAAGAGATGAAAGAATTATAGTTTATGAGTACTTGCCTAACAAAAGCTTGGATTTCTACATTTTTGATGCAAGCAGAAGAAATGTACTAGATTGGGAAAAACGATTTAGCATCATCGAAGGAATTGCCCAAGGACTTCTTTATCTACACAAATATTCAAGACTAAGAGTCATACATCGTGACTTGAAGGCAAGCAATATATTACTCGATGAAGAAATGAATCCTAAAATATCTGATTTTGGCACGGCTCGAATATTTGGATTAAGAGAATCTGAAGAAAACACAAATAGAGTAGTCGGTACACGTGGCTACATGGCTCCAGAGTATGCAATTAATGGCATTGTTTCAATCAAAACAGACATATTCAGCTTTGGGGTGTTGCTAATAGAGATTCTTAGCGGCAAAAAGAATAACAGTCGATTTGATTTAGATCGTCCTCATAATCTAATAGGATATGCATGGAAGCTCTGGAATGAAGGTAGAGTTTTAGAGCTAATGGACTCAGGATTAGATGAACCGAGCGTGCAAAACAAAGTGCAGAGAGGAATTCATATTGGCCTCTTGTGCGTTCAAGATCAAGCAAAAGACAGGCCTTCCATGTTAGATGTAATTTCTTTTCTGTCAAATGATTCTATTCAACTTGCTAAACCAAAGCAGCCAGCATACTTTATCGGTGACGTCGAGGAAGAGTCTGAGCTACATAACATCAGGCAAGAACATTATTCCACAAATTATGTCACAATCTCTGATCTAGATGGTAGATAA 1938 0.4154 MAKSFTSLLPLLLLIQICSSKSDGIAVYWGQNADEGNLRETCAVGIYSFVLIGFLTVFGNGKTPQLNLAGHCDPSSSSGCTSIGTEIKYCQRQGVKVMLSLGGGSAGYSLSSSKDAQNVSDYLWNNFLGGSSSSRPLGDATLDGIDFDIENSGEYWEDLAIYLNSHGTDSQKVYLSAAPQCLFPDAHLGTAIDKGVFDYVWVKFYDNSPCHYSEANTNAFFNAWNQWATSLNGSKIFLGLPASPEAEAGGYVPPDLLNSKVLPTVKKSPNYGGVMLCSRYSDRLNGYSNAMISMVYGKAKRNKKHGMERNEVEIFSFECIVVATNNFSDSNKLGEGGFGHVYKGTLIDGQEVAIKRLSKSSGQGVTEFKNEAKLMAKLQHTNLVRLLGLCIERDERIIVYEYLPNKSLDFYIFDASRRNVLDWEKRFSIIEGIAQGLLYLHKYSRLRVIHRDLKASNILLDEEMNPKISDFGTARIFGLRESEENTNRVVGTRGYMAPEYAINGIVSIKTDIFSFGVLLIEILSGKKNNSRFDLDRPHNLIGYAWKLWNEGRVLELMDSGLDEPSVQNKVQRGIHIGLLCVQDQAKDRPSMLDVISFLSNDSIQLAKPKQPAYFIGDVEEESELHNIRQEHYSTNYVTISDLDGR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00068 645 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 23 298 IPR001223 GO:0005975
Pral4350g00068 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral4350g00068 645 Pfam Glycosyl hydrolases family 18 25 253 IPR001223 GO:0005975
Pral4350g00068 645 CDD STKc_IRAK 333 598 - -
Pral4350g00068 645 Pfam Protein tyrosine and serine/threonine kinase 330 598 IPR001245 GO:0004672|GO:0006468
Pral4350g00068 645 CDD GH18_hevamine_XipI_class_III 24 293 IPR045321 -
Pral4350g00068 645 Gene3D Transferase(Phosphotransferase) domain 1 403 612 - -
Pral4350g00068 645 SMART serkin_6 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00068 645 SUPERFAMILY (Trans)glycosidases 21 290 IPR017853 -
Pral4350g00068 645 Gene3D Glycosidases 24 291 - -
Pral4350g00068 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 403 606 - -
Pral4350g00068 645 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 63 645 - -
Pral4350g00068 645 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Pral4350g00068 645 SUPERFAMILY Protein kinase-like (PK-like) 312 625 IPR011009 -
Pral4350g00068 645 Gene3D Phosphorylase Kinase; domain 1 292 402 - -
Pral4350g00068 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 292 402 - -
Pral4350g00068 645 ProSiteProfiles Protein kinase domain profile. 327 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00068 645 FunFam Acidic endochitinase SE2 23 295 - -
Pral4350g00068 645 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 142 150 IPR001579 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00068 Pral-Chr4350 426160 429599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00068 315 621 Receptor kinase-like Gene Family AT3G45860 55.987 3.06e-122 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4350g00068 PK_Tyr_Ser-Thr 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00068 - - lang:109358482 540.421