Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00066 ATGTCCACTGATAGTATTAAGGTTTACGAAAGAGAAAATGTTAATGGGCAGTGTTGTGAGATCATATGCCGGAACAATTGTTCTTGTGAGGCTTATGCACCAGTGAATAGAATCAACAAAACTGGATGCCAGATATGGCTTAAAGGAACCAGGTTCACTGAAGATGCAGGGTCAAAAGGACAGTCCATTTATATTGTTAGACTTCGGCAAGAAGTAAACAGGTGGTGGATATGGCTTATTATTGCGGTGGGAGGAAGCCTAGTATTACCTTTGATGTGCTACTTATGCTATGCCTCATTGAGAAAATATAGAGTAGAAGTGGACAGGAAAACCAGGCAAAAGAAGATATTACATGAAATTGGAGGCAGTGCTTTGATTTCCATGGTGTATGGCAAAGCCAAAAGAAACAAGAAAAATGGGAAGGAAAGGAATGAGGTTGAAATTTTCAGCTCTGAGTGCATTGTGGTTGCCACAAACAATTTCTCAGATTCTAACATGCTAGGAGAGGGCGGTTTTGGTCCTGTGTACAAGGGGACGCTAGCAGATGGGCAGGAAGTTGCAATAAAACGGCTGTCTAAAAGTTCTGGACAAGGGCTTACAGAATTCAAAAATGAGGCTAAACTTATGGCTAAATTGCAGCACACTAATCTTGTGAGGCTTTTGGGGCTCTGCATTGAAAGAGATGAAAGAATTATAGTTTATGAGTACATGCCTAACAAAAGCTTGGATTTCTACATTTTTGATGCAAGCAGAAGAAATGTACTAGATTGGGGAAAACGATTTAGCATCATCGAAGGAATTGCCCAAGGACTTCTTTATCTACACAAATATTCAAGACTAAGGGTCATACATCGTGACTTGAAGGCAAGCAATATATTACTCGATGAAGAAATGAATCCTAAAATATCTGATTTTGGCACGGCTCGAATATTTGGATTAAGAGAATCTGAAGAAAACACCAATAGAGTAGTCGGTACACGTGGCTACATGGCTCCAGAGTATGCAATTAATGGCATTGTTTCGATCAAAATAGACGTATTCAGCTTCGGGGTGTTGTTAATAGAGATTCTTAGTGGCAAAAAGAATAACAGTGGATTTGATTTAGATCGTCCTTATAATCTAATAGGATATGCATGGAAGCTCTGGAATGAAGGTAGAGTTTTAGAGCTAATGGACTCAGGATTAGATGAACCGAGCGTGCAAAACAAAGTGCAGAGAGGAATTCATATTGGCCTCTTGTGCGTTCAAGATCAAGCAAAAGACAGGCCTTCCATGTTAGATGTAATTTCTTTTCTGTCAAATGATTCTATTCAACTTGCCAAACCAAAGCAGCCAGCATACTTTATCGGTGACGTTGAGGAAGAGTCTGAGCTACATAACATCAGGCAAGAACATTATTCCACAAATTATGTCACAATCTCTGATCTAGATGGTAGATAA 1440 0.3944 MSTDSIKVYERENVNGQCCEIICRNNCSCEAYAPVNRINKTGCQIWLKGTRFTEDAGSKGQSIYIVRLRQEVNRWWIWLIIAVGGSLVLPLMCYLCYASLRKYRVEVDRKTRQKKILHEIGGSALISMVYGKAKRNKKNGKERNEVEIFSSECIVVATNNFSDSNMLGEGGFGPVYKGTLADGQEVAIKRLSKSSGQGLTEFKNEAKLMAKLQHTNLVRLLGLCIERDERIIVYEYMPNKSLDFYIFDASRRNVLDWGKRFSIIEGIAQGLLYLHKYSRLRVIHRDLKASNILLDEEMNPKISDFGTARIFGLRESEENTNRVVGTRGYMAPEYAINGIVSIKIDVFSFGVLLIEILSGKKNNSGFDLDRPYNLIGYAWKLWNEGRVLELMDSGLDEPSVQNKVQRGIHIGLLCVQDQAKDRPSMLDVISFLSNDSIQLAKPKQPAYFIGDVEEESELHNIRQEHYSTNYVTISDLDGR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00066 479 SMART serkin_6 161 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00066 479 Pfam Protein tyrosine and serine/threonine kinase 165 432 IPR001245 GO:0004672|GO:0006468
Pral4350g00066 479 Gene3D Phosphorylase Kinase; domain 1 133 236 - -
Pral4350g00066 479 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 479 - -
Pral4350g00066 479 ProSiteProfiles Protein kinase domain profile. 161 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00066 479 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 127 236 - -
Pral4350g00066 479 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 237 440 - -
Pral4350g00066 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 282 294 IPR008271 GO:0004672|GO:0006468
Pral4350g00066 479 Gene3D Transferase(Phosphotransferase) domain 1 237 446 - -
Pral4350g00066 479 SUPERFAMILY Protein kinase-like (PK-like) 144 460 IPR011009 -
Pral4350g00066 479 CDD STKc_IRAK 167 432 - -
Pral4350g00066 479 Pfam PAN-like domain 12 48 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00066 Pral-Chr4350 418937 421255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00066 154 447 Receptor kinase-like Gene Family AT4G23230 57.823 2.15e-122 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4350g00066 PK_Tyr_Ser-Thr 9.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00066 - - lang:109358482 681.019