Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00064 ATGGCCAAAAGTTTTCTATCTCTCCTTCCTTTGCTGCTTCTCATCCAAATTTGCTCCTTCAAATCTGATGACATCGCTATTTACTGGGGTGAGAACGTCGATGAAGGCAATCTTCGAGAAACATGTGCAGTAGGAATATACTCTTTTGTATTGATTGGCTTCCTTACGGTGTTTGGGAATGGCAAAACCCCTCAACTCAATGTTGCAGGTCACTGTGACCCTTCTTCATCATCTGGGTGCACCAGCATTGGCACGGAGATCAAATATTGTCAACGACAAGGGGTCAAGGTAATGCTCTCTCTTGGAGGAAGATCTATGGGTTATTCTTTATCTTCCTCAAAGGATGCTCAAAATGTTTCTGATTACTTATGGAACAATTTCTTCGGCGGAAGCTCATCTTCACGCCCACTTGGAGATGCCAAATTGGATGGCATTGATTTTGACATAGAGAATTCTGGGGAATACTGGGAGGACCTTGCAATTTACCTCAACTCACATGGCACGGATAGCCAGAAAGTGTACTTATCAGCAGCACCTCAATGCCCATTTCCTGATGCTCATCTTGGCACTTCGATTGATAAAGGTGTTTTTGACTTTGTTTGGGTAAAATTCTACAGCAATCCTCGCTGCCACTATTCAGAGGCTAATACTAATGCATTTTTCAATGCATGGAACCAGTGGGCGACATCATTAAATGGGTCAAAAATATTCCTGGGTTTGCCAGCATCTCCCGAAGCAGAGGCAGGTGGCTATGTTCCTGCTGATTTGTTAAACTCTAAGGTACTTCCCACTGTAAAGAAGTCACCTAACTATGGAGGTGTGATGTTATGGTCAAGGTACACAGATAGATTGAGCGGATATAGTAAGCGCCTTCACCTTGGTCCTCTTTGCACACCTCAAAGTGCTCCCAAATGCAGGAGCCATGACAATGGTTTTGAAGAAAGTTTTGGTTACATGTCCACTGATAGTATTAAGGTTCACGAAAGAGAGAATATTAGTGGACAGTGTTGTGAGATCATATGCCGGAACAATTGTTCTTGTGAGGCTTATGCACCGGTTAATAGAATTAACAAAACTGGATGCCAGATGTGGCTTAAAGGAACTAGGTTCATTGAAGATGCAGAGTCAAAAGGACAGTCCATTTATATTGTTAGACTTAGGCAAGAAGTAAGCAAGTGGTGGATATGGCTTATCATTGCAGTGGGAGGAAGCCTAGTATTACCTCTGATATGCTACTTATGCTATGCCTCATTGAGAAAATACAAAGCAGAAGTGGATAGGAAAACCAAGCAAAAGAAGATATTACATGAAATTGGAGGCAATGCGATGATTTCCATGGTGTATGGCAAAGCCAAAAGAAACAAGAAAAATGGGAAGGAAAGGAATGAGGTTGAAATTTTCAGCTCTGAGTGCATTGTGGTTGCCACAAACAATTTCTCAGATTCTAACAAGCTAGGAGAGGGCGGTTTTGGTCCTGTATATAAGCACACTAATCTTGTGAGGCTTTTGGGGCTCTGCATCGAAAGAGATGAAAGAATTATAGTTTATGAGTACATGCCTAACAAAAGCTTGGATTTCTACATATTTGATGCAAGCAGAAGAAATGTACTAGATTGGGAAAAACGGTTTAGCATCATTGAAGGAATTGCCCAAGGACTTCTTTATCTACACAAATATTCAAGACTAAAGGTCATACATCGTGACTTGAAGGCAAGCAATATATTACTTGATGAAGAAATGAATCCTAAAATATCTGATTTTGGCACGGCTCGAATATTTGAATTAAGAGAATCTGAAGAAAACACAAATAGAGTAGTCGGTACACGTGGCTACATGGCTCCAGAGTATGCAATTAATGGCATTGTTTCAATCAAAACAGACATATTCAGCTTTGGTGTGTTGCTAATAGAGATTCTTAGTGGCAAAAAGAATAACAGTGGATTTGATTTAGATCGTCCTTATAATCTAATAGGATATGCATGGAAGCTCTGGAATGAAGGTAGAGTTTTAGAGCTAATGGACTCAGGATTAGATGAACCGAGCGTGCAAAACAAAGTGCAGAGAGGAATTCATATTGGCCTCTTGTGCGTTCAAGATCAAGCAAAAGACAGGCCTTCCATGTTAGATGTAATTTCTTTTCTGTCAAATGATTCTATTCAACTTGCCAAACCAAAGCAGCCAGCATACTTTATCGGTGACGTTGAGGAAGAGTCTGAGCTACATGACATCAGGCATGAACATTATTCCACAAATTATGTCACAATCTCTAATCTAGATGGTAGGTAA 2286 0.4051 MAKSFLSLLPLLLLIQICSFKSDDIAIYWGENVDEGNLRETCAVGIYSFVLIGFLTVFGNGKTPQLNVAGHCDPSSSSGCTSIGTEIKYCQRQGVKVMLSLGGRSMGYSLSSSKDAQNVSDYLWNNFFGGSSSSRPLGDAKLDGIDFDIENSGEYWEDLAIYLNSHGTDSQKVYLSAAPQCPFPDAHLGTSIDKGVFDFVWVKFYSNPRCHYSEANTNAFFNAWNQWATSLNGSKIFLGLPASPEAEAGGYVPADLLNSKVLPTVKKSPNYGGVMLWSRYTDRLSGYSKRLHLGPLCTPQSAPKCRSHDNGFEESFGYMSTDSIKVHERENISGQCCEIICRNNCSCEAYAPVNRINKTGCQMWLKGTRFIEDAESKGQSIYIVRLRQEVSKWWIWLIIAVGGSLVLPLICYLCYASLRKYKAEVDRKTKQKKILHEIGGNAMISMVYGKAKRNKKNGKERNEVEIFSSECIVVATNNFSDSNKLGEGGFGPVYKHTNLVRLLGLCIERDERIIVYEYMPNKSLDFYIFDASRRNVLDWEKRFSIIEGIAQGLLYLHKYSRLKVIHRDLKASNILLDEEMNPKISDFGTARIFELRESEENTNRVVGTRGYMAPEYAINGIVSIKTDIFSFGVLLIEILSGKKNNSGFDLDRPYNLIGYAWKLWNEGRVLELMDSGLDEPSVQNKVQRGIHIGLLCVQDQAKDRPSMLDVISFLSNDSIQLAKPKQPAYFIGDVEEESELHDIRHEHYSTNYVTISNLDGR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00064 761 Pfam PAN-like domain 319 366 IPR003609 -
Pral4350g00064 761 Gene3D Phosphorylase Kinase; domain 1 449 495 - -
Pral4350g00064 761 Gene3D Transferase(Phosphotransferase) domain 1 520 727 - -
Pral4350g00064 761 CDD GH18_hevamine_XipI_class_III 24 292 IPR045321 -
Pral4350g00064 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Pral4350g00064 761 Gene3D Glycosidases 23 293 - -
Pral4350g00064 761 Gene3D Phosphorylase Kinase; domain 1 496 519 - -
Pral4350g00064 761 FunFam Acidic endochitinase SE2 23 293 - -
Pral4350g00064 761 SMART serkin_6 479 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00064 761 SUPERFAMILY Protein kinase-like (PK-like) 463 746 IPR011009 -
Pral4350g00064 761 SUPERFAMILY (Trans)glycosidases 22 289 IPR017853 -
Pral4350g00064 761 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 304 494 - -
Pral4350g00064 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 519 722 - -
Pral4350g00064 761 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 23 295 IPR001223 GO:0005975
Pral4350g00064 761 Pfam Glycosyl hydrolases family 18 25 282 IPR001223 GO:0005975
Pral4350g00064 761 Pfam Protein tyrosine and serine/threonine kinase 494 714 IPR001245 GO:0004672|GO:0006468
Pral4350g00064 761 ProSiteProfiles Protein kinase domain profile. 432 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00064 761 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 142 150 IPR001579 GO:0004553|GO:0005975
Pral4350g00064 761 Pfam Domain of unknown function (DUF3403) 719 761 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00064 Pral-Chr4350 411727 415418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00064 25 291 Glycoside Hydrolase AT5G24090 55.597 7.40e-108 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4350g00064 PK_Tyr_Ser-Thr 9.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00064 - - pcin:129290744 1045.8