Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00062 ATGTCCACTGATAGTATTAGGGTTTACGAAAGTGAGAGTCTTGGGGGGCAGTGTTGTGAGACCATATGCCGGAACAATTGTTCTTGTGAGGCTTATGCACCAGTGAATCAAGCTAACAATACTGGATGCCAGATATGGCTTAAAGGTACCAGGTTCACTGAAGATGCAAGGTTAAAAGGACAGTCAATCTATCTTGTTAGACAGAAAGTAAATAGGTGGTGGGTGTGGCTTATCGTTGCGGTGGGAGCAAGCCTAGCATTACCTCTGATCTGCTACTTATGCTACGCTTCATTGAGAAAATACAAAGCAGAAGTGGATAGGAAAACGAAGCAAATGAAGATATTACATGAAATTGGGGGCAATGCAATGATTTCTATGGTGTATGGCAGAACCAAAAGGAACAAGAAAGAGGCGAAGGAAAGACATGAGGTTGACATATTCAGTTTTGAGAGCATTGTGGTTGCCACAAACAATTTCTCAGATTCTAACAGGCTTGGAGAGGGCGGTTTTGGTCCTGTGTATAAGGGGACACTAAGTGATGGGCAGGAAGTTGCAATAAAACGGCTTTCTAATAGTTCTGGACAAGGGCTTACAGAATTCAAAAATGAGGCTAAACTTATGGCTAAACTGCAGCATACTAATCTTGTGAGGCTCTTGGGGTTCTGCATTGAAAGAGATGAAAGAATATTAGTCTATGAGTACATGCCTAACAAAAGCTTGGATTTCTACCTATTTGATGCCAGCAGAACAAAGGTATTAGATTGGGAAAAACGATTTAGCATCATTGAAGGAGTTGCTCAAGGACTTCTTTATCTGCACAAATATTCCAGGCTGAAAGTGATACATCGTGACTTGAAGGCGGGCAATATATTACTTGATGAAGAAATGAATCCTAAATTATCTGATTTTGGTATGGCTCGAATATTTGGATCAAGAGAATCTGAAGAAAACACAAATAGAGTAGTCGGTACACGTGGTTATATGGCTCCAGAATATGCAATCAATGGTGCTGTTTCAACCAAAATAGACATATTCAGTTTTGGTGTGTTGCTGATAGAGATTCTTAGTGGCAAAAAGAATTACAGTCGATTTGATTTCGATTGTCCTCTTAATCTAATAGGATATGCATGGCAGCTCTGGAACAATGGCAGAGCTTTAGAGCTAATAGAGCCAGCATTAGATGAACCGAGTGTGCAAAACAAAGTGCAGAGAGTTATTCATATTGGCCTCTTGTGCGTTCAAGATCAAGCAAAAGACAGGCCTTCCATGTTAGATGTAATTTCTTTTCTGTCAAATGATTATATTCAACTTGCTAAACCAAAGCAGCCAGCATACTTTAACGGTGACGTTGAGGAAGAGTCTGAGCTACATAACATCAAGCAAGAACATTATTCCGCAAATTATGTCACAATTTCCAATCTAGATGTCAGATAA 1434 0.3982 MSTDSIRVYESESLGGQCCETICRNNCSCEAYAPVNQANNTGCQIWLKGTRFTEDARLKGQSIYLVRQKVNRWWVWLIVAVGASLALPLICYLCYASLRKYKAEVDRKTKQMKILHEIGGNAMISMVYGRTKRNKKEAKERHEVDIFSFESIVVATNNFSDSNRLGEGGFGPVYKGTLSDGQEVAIKRLSNSSGQGLTEFKNEAKLMAKLQHTNLVRLLGFCIERDERILVYEYMPNKSLDFYLFDASRTKVLDWEKRFSIIEGVAQGLLYLHKYSRLKVIHRDLKAGNILLDEEMNPKLSDFGMARIFGSRESEENTNRVVGTRGYMAPEYAINGAVSTKIDIFSFGVLLIEILSGKKNYSRFDFDCPLNLIGYAWQLWNNGRALELIEPALDEPSVQNKVQRVIHIGLLCVQDQAKDRPSMLDVISFLSNDYIQLAKPKQPAYFNGDVEEESELHNIKQEHYSANYVTISNLDVR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00062 477 SMART serkin_6 159 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00062 477 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 235 438 - -
Pral4350g00062 477 Gene3D Transferase(Phosphotransferase) domain 1 235 443 - -
Pral4350g00062 477 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 125 234 - -
Pral4350g00062 477 Pfam Protein kinase domain 160 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00062 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Pral4350g00062 477 Gene3D Phosphorylase Kinase; domain 1 121 234 - -
Pral4350g00062 477 CDD STKc_IRAK 165 430 - -
Pral4350g00062 477 ProSiteProfiles Protein kinase domain profile. 159 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4350g00062 477 Pfam PAN-like domain 14 48 IPR003609 -
Pral4350g00062 477 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 68 473 - -
Pral4350g00062 477 SUPERFAMILY Protein kinase-like (PK-like) 143 453 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00062 Pral-Chr4350 399523 402327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00062 147 446 Receptor kinase-like Gene Family AT3G45860 56.623 1.88e-124 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4350g00062 Pkinase 6.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00062 - - lang:109358482 678.707