Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00050 ATGAGCGTGGTTGGTTTTGATGTTGGGAATGAGAGCTGCATCGTTGCTGTTGCAAGGCAGAGGGGGATTGATGTTGTGCTCAATGATGAGTCCAAGCGTGAAACTCCTGCAGTTGTATGCTTCGGTGACAAACAAAGGTTCATTGGGACTGCCGGGGCTGCATCTACTATGATGAACCCCAAGAATTCAATCTCACAGATAAAGAGACTAATTGGTAGACAATTTTCCGACCCAGAATTGCAGCGGGATCTGAAATCATTGCCTTATGCTGTCACTGAAGGGCCTGATGGATTTCCATTAATTCATGCACGGTATTTGGGTGAAGTTAGAACATTTACGCCTACTCAAGTTCTGGGAATGGTGTTGTCAGATCTCAAGGGGATAGCTGAGAAGAATCTGAATGCAGCTGTTGTTGATTGTTGCATTGGAATTCCAGTTTATTTTACTGATCTTCAGAGAAGGGCAGTCTTAGATGCAGCAAAGATTGCTGGTCTGCATCCTCTTCGCTTGATTCATGAAACAACGGCAACTGCCTTGGCTTATGGAATTTATAAAACAGATCTTCCTGAAAATGATCAACTGAATGTTGCCTTTGTTGATATCGGACATGCTAGCATGCAAGTGTGCATTGCTGGCTTTAAAAAGGGGCAGCTGAAAGTATTGGCCCATTCATTTGATAGGTCTCTAGGTGGTAGAGATTTTGATGAGGTCTTATTTAATCACTTTGCTGCAAAATTTAAGGAGGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCTTGTCTGAGGCTCAGGGCTGCATGTGATAAGCTGAAGAAGGTTCTCAGTGCAAATCCAGAGGCACCTCTGAACATTGAATGCCTAATGGAAGAGAAGGATGTCAGGGGATTCATCAAGCGTGAGGATTTTGAGCAACTAAGTGTTCCAATTTTGGAACGTGTGAAGGCACCTTTAGAGAAGGCATTAGCAGAAGCAAACCTTACTGTTGAGGATATTCACATGGTTGAGGTGGTTGGCTCAGGTTCTCGCGTACCAGCTATAAACAAAATATTGACAGAATTTTTCCAAAAGGAGCCAAGGCGCACAATGAATGCAAGTGAGTGTGTTGCCAAGGGGTGTGCCTTGCAATGTGCAATTCTTAGTCCGACATTTAAAGTGCGAGAGTTTCAGGTCAATGAAAGCTTTCCATTTTCAATTTCACTGTCATGGAAAGGCTCTGGTCCAGATGCACAAGAAAATGGAGCAGATAATCGCCAAAGTACTGTTGTTTTTCCCAAAGGAAATGCCATACCGAGTGTCAAGGCCCTGACATTTTATAGGTCAGGAACATTTTCTGTTGATGTGCAGTATGATGATACGAGTATGCTGCAAGGACCTGCAAAGATTAGCACATATACTATTGGTCCTTTCCAAACTACAAAGAGTGAAAGTGCGAAAGTTAAAGTGAAAGTTCGTCTGAATTTGCATGGAATTGTATTTGTTGAGTCAGCTACTCTTCTGGAGGAGGAAATCGTTGAGGTTCCAGTGTCAAAAGAACCAGCAGGAGAAAATGCTAAGATGGACACTGATGAGGCTCCTACTGATGCTGCCGCACCACCACCGTGCTCTAATGATACTGATGTCAATATGCAAGATGCAAAGGCAACTTCTGAAACCTCTGGGGTTGAAAATGGCATCCCAGATACAGCAGACAAGCCTGTGCAGATGGAGACTGATACCAAGGCTGAGGCTCCGAAAAAGAAGGTCAAGAAGACAAATATACCTTTTTCAGAGCAGGTTTATGGAGCCCTGGCCCCTGCAGATCTCCAGAAAGCTGTAGAGAAGGAGTTTGAACTGGCTTTACAAGATCGAGTAATGGAGGAAACAAAAGACAGGAAAAATGCAGTTGAGGCATATGTTTATGACATGAGAAACAAGCTTGCTGACAAATACCAAGATTTTGTCACTGCTTCGGAGAGGGAGGAGTTTAATGCCAAACTTCAGGAGGTGGAAGACTGGTTATATGAAGAGGGTGAAGATGAAACTAAAGGTGTATACATTGCCAAGCTTGAGGAACTCAAGAGGCGAGGTGATCCAATTGAGGAGCGTTACAAGGAATTTATGGAGAGAGGTACAATAATCGATCAGTTCATCTACTGCATAAATAGTTACAGAGAAGCTGCCATGTCAAATGATCCCAAATTTGATCATATTGACATCTCTGAGAAGCAGAAGGTATTGAATCAATGTGTGGAAGCTGAGGCCTGGCTTAGGGAGAAGAAGCAGCAGCAGGATTCACTTCCAAAACATGCTCCTCCTGTACTCCTATCAGCTGACATAAGAAAGAAAGCTGAGACAGTTGATAGGTTCTGTAAGCCGATCATGACAAAACCAAGGCCGGCCAAGCCAGCTACTCCTGAAGCAACCGCAACCCCACCTCCTCAGGGTGGTGAACAGCCGCCTCAACAAACTGAGGGGGATGCAAACACCAATGCTAGTGCCAGTGCCAATGAAAATGCCGGGGACAATGCTGCTGGTCAGGCTCCACCGCCAGCGACTGAACCAATGGAGACTGACAAGTCAGAGAACACAGGCTCTGCATAA 2583 0.4452 MSVVGFDVGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPYAVTEGPDGFPLIHARYLGEVRTFTPTQVLGMVLSDLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLDAAKIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARACLRLRAACDKLKKVLSANPEAPLNIECLMEEKDVRGFIKREDFEQLSVPILERVKAPLEKALAEANLTVEDIHMVEVVGSGSRVPAINKILTEFFQKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSGPDAQENGADNRQSTVVFPKGNAIPSVKALTFYRSGTFSVDVQYDDTSMLQGPAKISTYTIGPFQTTKSESAKVKVKVRLNLHGIVFVESATLLEEEIVEVPVSKEPAGENAKMDTDEAPTDAAAPPPCSNDTDVNMQDAKATSETSGVENGIPDTADKPVQMETDTKAEAPKKKVKKTNIPFSEQVYGALAPADLQKAVEKEFELALQDRVMEETKDRKNAVEAYVYDMRNKLADKYQDFVTASEREEFNAKLQEVEDWLYEEGEDETKGVYIAKLEELKRRGDPIEERYKEFMERGTIIDQFIYCINSYREAAMSNDPKFDHIDISEKQKVLNQCVEAEAWLREKKQQQDSLPKHAPPVLLSADIRKKAETVDRFCKPIMTKPRPAKPATPEATATPPPQGGEQPPQQTEGDANTNASASANENAGDNAAGQAPPPATEPMETDKSENTGSA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00050 860 MobiDBLite consensus disorder prediction 511 566 - -
Pral4350g00050 860 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Pral4350g00050 860 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 533 IPR029047 -
Pral4350g00050 860 Gene3D - 598 706 IPR029048 -
Pral4350g00050 860 FunFam Heat shock 70 kDa protein 4 111 206 - -
Pral4350g00050 860 PANTHER HSC70CB, ISOFORM G-RELATED 1 851 - -
Pral4350g00050 860 PRINTS 70kDa heat shock protein signature 332 348 - -
Pral4350g00050 860 PRINTS 70kDa heat shock protein signature 363 383 - -
Pral4350g00050 860 PRINTS 70kDa heat shock protein signature 30 42 - -
Pral4350g00050 860 PRINTS 70kDa heat shock protein signature 2 15 - -
Pral4350g00050 860 PRINTS 70kDa heat shock protein signature 140 160 - -
Pral4350g00050 860 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 697 IPR029048 -
Pral4350g00050 860 Gene3D Actin; Chain A, domain 4 230 313 - -
Pral4350g00050 860 FunFam Heat shock 70 kDa protein 14 387 595 - -
Pral4350g00050 860 FunFam Heat shock 70 kDa protein 4 1 76 - -
Pral4350g00050 860 FunFam Heat shock 70 kDa protein 4 38 113 - -
Pral4350g00050 860 Gene3D - 38 113 - -
Pral4350g00050 860 CDD HSPA4_like_NDB 2 381 - -
Pral4350g00050 860 FunFam Heat shock 70 kDa protein 4 230 313 - -
Pral4350g00050 860 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Pral4350g00050 860 MobiDBLite consensus disorder prediction 813 835 - -
Pral4350g00050 860 Gene3D - 186 360 - -
Pral4350g00050 860 MobiDBLite consensus disorder prediction 537 557 - -
Pral4350g00050 860 Gene3D - 5 374 - -
Pral4350g00050 860 MobiDBLite consensus disorder prediction 798 812 - -
Pral4350g00050 860 MobiDBLite consensus disorder prediction 782 860 - -
Pral4350g00050 860 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pral4350g00050 860 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Pral4350g00050 860 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 719 795 IPR029048 -
Pral4350g00050 860 FunFam Heat shock 70 kDa protein 4 597 707 - -
Pral4350g00050 860 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00050 Pral-Chr4350 328465 333783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00050 4 438 Calmodulin-binding Proteins AT1G16030 35.616 3.49e-86 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00050 K09489 - gmx:100778196 1396.33