Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4350g00042 ATGGGTCTTAATTCAAACCGAGTCGATCACTTCGATTCTCACCACCAAACTGTCGTCAGAATCCAAACCGATATTCCTCCTCCGTCCCTGGAAATCCACTCGGTTCGCCTTCCTCCTGAGCAAACCACTCTCCAGAAGCTCAAGCGCAGGCTCTCTGAGATCTTCTTCCCCGATGACCCTCTTCATGGCTTCAAGAACCAAACTCGCTTCACCAAACTCATTCTCGCTCTCCAGTTTCTCTTCCCCATTTTCCAGTGGGCTCCTCACTACTCCCTCAACCTACTCCGTTCTGATATCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATAAGCTACGCAAAGCTTGCGAATTTGCCACCCATAATCGGACTATATTCAAGTTTTGTGCCTCCATTGATATACTCTCTGCTTGGGAGCTCGAGGCATCTTGGGGTTGGTCCTGTGTCCATAGCCTCTCTGGTTATGGGGTCAATGTTGAGCGAATCAGTTTCTTTCACTTCAGATCCAATCCTCTATCTCAAACTCGCTTTCACTGCCACCTTCTTTGCTGGTTTGTTCCAATCTTCCCTGGGATTTCTCAGGTTAGGGTTTGTGATTGACTTTCTGTCAAAGGCCACGCTGGTGGGTTTCATGGCAGGGGCAGCCATTATAGTGTCGCTGCAACAGCTAAAAGGGTTACTTGGAATTACTCACTTCACTTCCAAGATGCAAATGGTTCCTGTTATGTCCTCTGTTTTCACTCACAGGGACGAGTGGTCATGGCAAACAATTGTACTCGGATTCGCCTTCTTGGCTTTCCTGCTCGCAACAAGGCACATTAGCATGAAGAAACCAAAACTTTTCTGGGTGTCAGCAGCTGCCCCATTGACATCGGTTGTACTGTCAACAATTTTGGTCTTTCTTCTCAGGGACAAGGCTCATGGGATTGCAATTATTGGACACTTACCAAAAGGCCTTAATCCACCATCAACTAACATGCTGTACTTCTCTGGTCCTCATTTGGCACTTGCAATCAAAACTGGCATTGTGACTGGGATTCTATCTCTTACTGAAGGAATTGCAGTAGGAAGAACATTTGCTGCACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTAATGAACATGGCTGGCTGTTGTTCTTCATGCTATGTCACTACAGGATCATTTTCTCGATCGGCTGTCAACTACAACGCTGGAGCACAGACCGCGGTCTCAAACATAATAATGGCTGCAGCTGTTCTTGTGACCCTTTTGTTTCTCATGCCTCTGTTCTATTATACACCAAACGTGGTCTTGGGAGCCATTATCATCACTGCTGTGGTAGGCCTGATAGATTATCAAGGTGCATATAAATTGTGGAAAGTCGACAAGCTTGATTTCTTGGCTTGCGTGTGCTCTTTCTTTGGTGTTCTGTTCATCTCAGTGCCTCTAGGCCTTGGCATTGCGGTTTCAATTTCAGTCTTCAAGGTTCTGCTTCATGTGTCTCGGCCGAACACTGTAGTGTTGGGGAACATACCGGGAACTCAAATATTTCACAACTTAAATAGATATAGAGAAGCTTTAAGGGTTCCTTCATTTCTCATTTTGGCTGTTGAATCTCCCTTCTACTTTGCTAATTCAACATACTTGCAAGAAAGGATTCTGAGATGGGTCCGAGAAGAGGAAGAGCGCATAAAAGCAAACAATGAAAGCACATTGAAGTGCATAATTCTAGATATGACAGCTGTAACAGCCATAGACACGAGTGGAATTGACACACTACGTGAAGTTAGAAAGATTCTGGAAAAAAGATCACTTCAGCTTGTGTTGACAAATCCTGCAGGGACTGTGATGGAAAAGTTGCATCAGTCAAATATCTTGGATTCCTTTGGGCAGAAAGGCCTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCTTTGTCCTGGAAAGCTTAA 1968 0.4533 MGLNSNRVDHFDSHHQTVVRIQTDIPPPSLEIHSVRLPPEQTTLQKLKRRLSEIFFPDDPLHGFKNQTRFTKLILALQFLFPIFQWAPHYSLNLLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSESVSFTSDPILYLKLAFTATFFAGLFQSSLGFLRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGITHFTSKMQMVPVMSSVFTHRDEWSWQTIVLGFAFLAFLLATRHISMKKPKLFWVSAAAPLTSVVLSTILVFLLRDKAHGIAIIGHLPKGLNPPSTNMLYFSGPHLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNMAGCCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNVVLGAIIITAVVGLIDYQGAYKLWKVDKLDFLACVCSFFGVLFISVPLGLGIAVSISVFKVLLHVSRPNTVVLGNIPGTQIFHNLNRYREALRVPSFLILAVESPFYFANSTYLQERILRWVREEEERIKANNESTLKCIILDMTAVTAIDTSGIDTLREVRKILEKRSLQLVLTNPAGTVMEKLHQSNILDSFGQKGLYLTVGEAVADISLSWKA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4350g00042 655 ProSiteProfiles STAS domain profile. 526 649 IPR002645 -
Pral4350g00042 655 Pfam STAS domain 527 645 IPR002645 -
Pral4350g00042 655 CDD STAS_SulP_like_sulfate_transporter 527 642 - -
Pral4350g00042 655 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Pral4350g00042 655 Pfam Sulfate permease family 95 474 IPR011547 GO:0016020
Pral4350g00042 655 NCBIfam sulfate permease 82 645 IPR001902 GO:0016020|GO:0055085
Pral4350g00042 655 SUPERFAMILY SpoIIaa-like 532 647 IPR036513 -
Pral4350g00042 655 PANTHER SULFATE TRANSPORTER 45 648 IPR001902 GO:0016020|GO:0055085
Pral4350g00042 655 FunFam Sulfate transporter 31 506 652 - -
Pral4350g00042 655 Gene3D STAS domain 506 650 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4350g00042 Pral-Chr4350 294136 299767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4350g00042 1 655 Inorganic Solute Cotransporters AT3G15990 75.455 0.0 1034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4350g00042 K17471 - gmx:100817604 1090.49