Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral434g00003 ATGGCAGCCGCCGCCGCCATCTCTCCTGGCGCTACTCTCTTAGCTTCCAACACAAATCAAAGATGGTCTTCTCCGAACAACACATTCTCCCTTCATTTCATTCCTTCCAACCCCCAAACTTCTCCTCCTACCTTCATCGCTGCCATCGTGTACTCCGGCGGCACTCCCGTCATCTGGTCCGCCGGTAATGGCTTGGCTGTGGACTCTGGCGGCTCCTTCCGGTTCCTTTCTACCGGAACCCTTCACCTCGTAAACGGGTCAGGGTCAATCGTTTGGGACTCCAGAACTTCAGATATGGGTGTCTCCTCCGCCACCCTACAAGCCGACGGCAACCTCGTGCTCTCAAATGGAACTGGCACCGTCTGGTCAACGTTCGACCATCCGACTGATACAATTGTTCCGTCTCAGAACTTCACTTCTGGTATGGTTTTGCGATCTGGATTGTACTCGTTTAATCTTATTCCAAGTGGAAATTTGACCCTTAAATGGAATGATAGTATAGAATACTGGAATCAGGGTTTGAATTCATCTGTGAATGTGAAGTTAAATTCACCGGTTTTGAGGTTGCAATCAATAGGGCTTTTGCAGCTCTATGATTCTAATCTTTCAACTCCAGCGGTTATTGCTTATAGCAGTGACTACGCTGAAGGTAGTGATGTGTTGAGAACTTTGAAGATAGATAGTGATGGGAACTTGAGGATTTACAGTTCTGCAAGAGGTAGTGGAACTGCAACTCCAAGATGGTCTGCTGTAGATCAATGTAAGGTTTTTGGTTACTGTGGGAGCTATGGTATTTGCAGTTACAATGATTCAGACCCTATCTGTGGTTGCCCGTCTCAGAATTTTGAGATGATTGATCCCAGTAACAGCCGAAAAGGATGCAGAAGGAAGGTGAATCTTGATGATTGTCCTGGAAGTGCAACTATGTTGCAATTGGAACATGCTCAGTTCTTGACTTATCCGCCTGAGCTGAGTACACAAGTCTTCTTCATTGGTATATCAGCTTGTAGAGGTAATTGTCTGGCGGGTTCCTGCTTTGCTTCTACTTCATTATCAGATGGCACAGGTCAGTGTTACATAAAAACATCGGATTTTATCAGTGGGTATCAAAGTCCTGCACTGCCTAGCACTTCATATGTCAAGGTTTGTGGACCAGTGGCTCCAAATCCTCCAGCTTCCTTGGATGGAACTGAGAAGAAGCATCGTGGAAGGTTACCAGCTTGGGTTGTCGCTATAGTGGTTTTGGGTACCCTTTTAGCTTTGATTGCCTTTGAAGGTGGCTTGTGGTTCTGGTGTTGTAGGAACAGAACAATATTAGGTGGGTTGTCTGCACAATATGCTCTTCTTGAGTATGCTTCTGGTGCACCAGTCCAGTTCTCATACAAGGATCTGCAGCGGGCAACAAAAGGGTTTAAAGAGAAGCTTGGGGCTGGGGGTTTTGGTGCTGTGTAGGGAGTCCTTGCTAATAAATCTGTTGTTGCAGTTAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAACAATTTAGGATGGAAGTAGCTACTATAAGCAGCACTCATCATCTCAATTTGGTGAGGCTGATTGGTTTCTGCTCGGAGGGGCGCCACAGGCTTTTAGTGTATGAGTTCATGAAAAATGGTTCGCTTGATAATCTTCTGTTTCTGACCGAAGAACAGTCAGAATTGTTGAATTGGGAGTATCGCTTCAACATTGCCCTAGGCACTGCAAGGGGCATCACATATCTTCACGAGGAATGTCGAGACTGCATTGTCCATTGTGATATAAAACCTGAAAACATTCTGTTGAACGAGAATTACATTGCGAAAGTCTCGGATTTCGGCCTTGCCAAGCTTGTAAATCCAAAAGACCACAGGCACCGAACCCTGACCAGTGTGAGAGGAACACGAGGGTATTTAGCTCCTGAATGGCTAGCTAATCTTCCCATAACTTCCAAATCTGATGTTTACAGTTATGGTATGGTTTTGCTGGAGATTGTGAGTGGAAGGAGGAACTTTGAAATGCTCGATGACAGAAACAGGAAGAAGTTCTCCAACTGGGCTTATGAAGAGTTTGAGAAAGGCAACATCATGGGAATAGTTGACAGAAGACTGAATGACCAAGTTGATATGGAGCAAGTACAAAGGGCAATTCAAGTAAGCTTCTGGTGCATCCAGGAGCATCCATCTCAGAGGCCAACAATGGGTCGAGTTGTGCAAATGCTCGAAGGGATAACTGAGATTGAGAAGCCGCCCGCACCGAAAGCCTTCATAGAAGGATCTGGTGGTGGAACAAGCACTTACTTGAGCAGCAATACTAGTGCGTTCTCCACAGTTGCTGCCTCAGCCCCTGGTACTACCTCATCCTCATTCCAGAACAGTGGTGCTTCAAGTTTGACTCCAGGAAGGAAAATTGAGAAGGCAACTTCCTCTCTTCTACAACCAGACCAATTGTAA 2451 0.4594 MAAAAAISPGATLLASNTNQRWSSPNNTFSLHFIPSNPQTSPPTFIAAIVYSGGTPVIWSAGNGLAVDSGGSFRFLSTGTLHLVNGSGSIVWDSRTSDMGVSSATLQADGNLVLSNGTGTVWSTFDHPTDTIVPSQNFTSGMVLRSGLYSFNLIPSGNLTLKWNDSIEYWNQGLNSSVNVKLNSPVLRLQSIGLLQLYDSNLSTPAVIAYSSDYAEGSDVLRTLKIDSDGNLRIYSSARGSGTATPRWSAVDQCKVFGYCGSYGICSYNDSDPICGCPSQNFEMIDPSNSRKGCRRKVNLDDCPGSATMLQLEHAQFLTYPPELSTQVFFIGISACRGNCLAGSCFASTSLSDGTGQCYIKTSDFISGYQSPALPSTSYVKVCGPVAPNPPASLDGTEKKHRGRLPAWVVAIVVLGTLLALIAFEGGLWFWCCRNRTILGGLSAQYALLEYASGAPVQFSYKDLQRATKGFKEKLGAGGFGAVYXGVLANKSVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNLLFLTEEQSGXLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLNENYIAKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEMLDDRNRKKFSNWAYEEFEKGNIMGIVDRRLNDQVDMEQVQRAIQVSFWCIQEHPSQRPTMGRVVQMLEGITEIEKPPAPKAFIEGSGGGTSTYLSSNTSAFSTVAASAPGTTSSSFQNSGASSLTPGRKIEKATSSLLQPDQL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral434g00003 818 Gene3D - 2 126 IPR036426 -
Pral434g00003 818 ProSiteProfiles Bulb-type lectin domain profile. 1 127 IPR001480 -
Pral434g00003 818 PANTHER OS07G0415500 PROTEIN 4 754 - -
Pral434g00003 818 Pfam S-locus glycoprotein domain 215 278 IPR000858 GO:0048544
Pral434g00003 818 SMART blect_4 13 128 IPR001480 -
Pral434g00003 818 ProSiteProfiles Bulb-type lectin domain profile. 129 247 IPR001480 -
Pral434g00003 818 Pfam D-mannose binding lectin 67 139 IPR001480 -
Pral434g00003 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 128 250 - -
Pral434g00003 818 Gene3D Transferase(Phosphotransferase) domain 1 544 754 - -
Pral434g00003 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 173 IPR036426 -
Pral434g00003 818 Gene3D - 128 250 IPR036426 -
Pral434g00003 818 ProSiteProfiles Protein kinase domain profile. 469 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral434g00003 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Pral434g00003 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 127 - -
Pral434g00003 818 Pfam Protein kinase domain 472 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral434g00003 818 ProSitePatterns Protein kinases ATP-binding region signature. 475 497 IPR017441 GO:0005524
Pral434g00003 818 CDD STKc_IRAK 475 745 - -
Pral434g00003 818 MobiDBLite consensus disorder prediction 781 818 - -
Pral434g00003 818 FunFam S-receptor-like serine/threonine-protein kinase 443 543 - -
Pral434g00003 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 544 752 - -
Pral434g00003 818 SMART serkin_6 469 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral434g00003 818 Gene3D Phosphorylase Kinase; domain 1 442 543 - -
Pral434g00003 818 SUPERFAMILY Protein kinase-like (PK-like) 452 743 IPR011009 -
Pral434g00003 818 PIRSF SRK 1 799 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral434g00003 Pral-Chr434 18922 21405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral434g00003 442 752 Receptor kinase-like Gene Family AT5G20050 44.923 2.90e-82 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral434g00003 Pkinase 3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral434g00003 - - qsa:O6P43_004111 1257.28