Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral434g00002 | ATGGCAGATGAATTTTCGGATTTGGACTGGATTCGCCATCATCTTCTTGGTGAGTTTTCGTCCTCAGAAACCTTCTTCTCCGATCTGTATCCTGTAAAACTCGAGGATTCTTCCTCGGAGTTTGATCTGAATCCGTGTGCCCCGGTGCAAAGTTTTGGCTTTGAAGATGTGGAGGTTTGGAACCCCGTGTTGGCGGAGGTCGAAATGGAGAAGAAGCCCACGTCGCCTGAGACTGACGAGAAGTCCGTGTGCGGTGAGGCGATTATGCGGCGGTACAGGGGCGTTCGGAGGAGGCCGTGGGGCAAGTTTGCGGCGGAGATCCGTGATCCGACCCGGAAAGGGACACGGGTTTGGCTGGGGACGTTTGAGAGTGAGATTGATGCTGCGAGGGCTTATGACTGTGCTGCCTTCAGAATGAGGGGTCGAAGGGCAATATTGAACTTTCCTCTGGAGGCCGGCCAATCTGAACCGACGCCGAACCGGTGTGGCCGGAAAAGGAGAAGACAAAGTTCACCGGCGGAGCTGTACCAAATTTCCACTGCCATTTAA | 549 | 0.541 | MADEFSDLDWIRHHLLGEFSSSETFFSDLYPVKLEDSSSEFDLNPCAPVQSFGFEDVEVWNPVLAEVEMEKKPTSPETDEKSVCGEAIMRRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFESEIDAARAYDCAAFRMRGRRAILNFPLEAGQSEPTPNRCGRKRRRQSSPAELYQISTAI | 182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral434g00002 | 182 | MobiDBLite | consensus disorder prediction | 152 | 182 | - | - | |
Pral434g00002 | 182 | Pfam | AP2 domain | 91 | 141 | IPR001471 | GO:0003700|GO:0006355 | |
Pral434g00002 | 182 | Gene3D | AP2/ERF domain | 90 | 151 | IPR036955 | GO:0003700|GO:0006355 | |
Pral434g00002 | 182 | PRINTS | Ethylene responsive element binding protein signature | 131 | 151 | IPR001471 | GO:0003700|GO:0006355 | |
Pral434g00002 | 182 | PRINTS | Ethylene responsive element binding protein signature | 92 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Pral434g00002 | 182 | FunFam | Ethylene-responsive transcription factor 2 | 90 | 151 | - | - | |
Pral434g00002 | 182 | CDD | AP2 | 99 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Pral434g00002 | 182 | PANTHER | DNA-BINDING DOMAIN | 74 | 160 | IPR044808 | GO:0003700|GO:0009873 | |
Pral434g00002 | 182 | ProSiteProfiles | AP2/ERF domain profile. | 91 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Pral434g00002 | 182 | SMART | rav1_2 | 91 | 155 | IPR001471 | GO:0003700|GO:0006355 | |
Pral434g00002 | 182 | SUPERFAMILY | DNA-binding domain | 91 | 151 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral434g00002 | Pral-Chr434 | 10843 | 11737 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral434g00002 | 3 | 175 | AP2-EREBP Transcription Factor Family | AT5G07580 | 45.550 | 4.28e-42 | 138 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral434g00002 | AP2 | 1.3e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral434g00002 | - | - | ccaj:109813158 | 180.259 |