Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00072 ATGCCGAATGAAAGTAAAATCGAAGGTCATGCCACAGTTGCGGTTGATGTGCCTGATGTCGAGAAGCAGGACTCTCGAGAGAGTAACTTATGTAGCTTAGGCGGTGGTGAGGATCTAAAATCGATTGCAGTTTCCCCAACTAAGGGCTACTTGTCTAGGTCTGGAAGTTCCCAAGAACAATGCAGAATATGTCAGCAAGAAAAAGAAGAAAGTTTGATAGATCTTGGATGTCAGTGTCGGGGTGGATTGGCAAAAGCGCATCAAACATGCATAGAAACCTGGTTTCGCACAAGAGGATCTAACACATGTGAGATCTGCCAGCAAGTAGCTCAGAATGTGTCACCTCCTGAATCCCAGCCAAATCAGACAGATTACTGGGTATGGAGGATTGACCCGACAATGAGGACACAGGATCGTGAAAGGGGATGTTTTAGTCCTCTCTGGGTTGCATTTTCAATTCTCATCGGTGGTCTTTTGTTGGATGTGCTCATATCCATCACATTTGGTGTCTCTGCACTACCTGTAAACATAATAATCGGTGTTATCATTGTCCTAGGACTTGGCACTGCACTTCGGCTGGCCCTAGAATTCTGCCATGAGTGGGGTTTAAGGAGAGCTGGACAGAGGGTGGAAAGTAATGTGAATCATGGGTACCACCCTGCTGTGTAA 669 0.4604 MPNESKIEGHATVAVDVPDVEKQDSRESNLCSLGGGEDLKSIAVSPTKGYLSRSGSSQEQCRICQQEKEESLIDLGCQCRGGLAKAHQTCIETWFRTRGSNTCEICQQVAQNVSPPESQPNQTDYWVWRIDPTMRTQDRERGCFSPLWVAFSILIGGLLLDVLISITFGVSALPVNIIIGVIIVLGLGTALRLALEFCHEWGLRRAGQRVESNVNHGYHPAV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00072 222 ProSiteProfiles Zinc finger RING-CH-type profile. 53 113 IPR011016 GO:0008270
Pral4346g00072 222 MobiDBLite consensus disorder prediction 1 33 - -
Pral4346g00072 222 PANTHER ZINC FINGER, RING-CH-TYPE 42 178 - -
Pral4346g00072 222 SMART ringv_2 60 107 IPR011016 GO:0008270
Pral4346g00072 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 117 IPR013083 -
Pral4346g00072 222 CDD RING_CH-C4HC3_MARCH 61 107 - -
Pral4346g00072 222 Pfam RING-variant domain 61 106 IPR011016 GO:0008270
Pral4346g00072 222 SUPERFAMILY RING/U-box 56 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00072 Pral-Chr4346 452878 458614 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00072 58 123 C3H Transcription Factor Family AT2G37950 46.377 4.48e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00072 - - pvy:116133177 299.286