Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00068 ATGCCGAATGAAAGTAAAATCGAAGGTCATGCCACAGTTGCGGTTGATGTGCCTGATGTCGAGAAGCAGGACTCTCGAGAGAGTAACTTATGTAGCTTAGGCGGTGGTGAGGATCTAAAATCGATTGCAGTTTCCCCAACTAAGGGCTACTTGTCTAGGTCTGGAAGTTCCCAAGAACAATGCAGAATATGTCAGCAAGAAAAAGAAGAAAGTTTGATAGATCTTGGATGTCAGTGTCGGGGTGGATTGGCAAAAGCGCATCAAACATGCATAGAAACCTGGTTTCGCACAAGAGGATCTAACACATGTGAGATCTGCCAGCAAGTAGCTCAGAATGTGTCACCTCCTGAATCCCAGCCAAATACAGATTACTGGGTATGGAGGATTGACCCGACAATGAGGACACAGGATCGTGAAAGGGGATGTTTTAGTCCTCTCTGGGTTGCATTTTCAATTCTCATCGGTGGTCTTTTGTTGGATGTGCTCATATCCATCACATTTGGTGTCTCTGCACTACCTGTAAACATAATAATCGGTGTTATCATTGTCCTAGGACTTGGCACTGCACTTCGGCTGGCCCTAGAATTCTGCCATGAGTGGGGTTTAAGGAGAGCTGGACAGAGGGTGGAAAGTAATGTGAATCATGGGTACCACCCTGCTGTGTAA 666 0.4595 MPNESKIEGHATVAVDVPDVEKQDSRESNLCSLGGGEDLKSIAVSPTKGYLSRSGSSQEQCRICQQEKEESLIDLGCQCRGGLAKAHQTCIETWFRTRGSNTCEICQQVAQNVSPPESQPNTDYWVWRIDPTMRTQDRERGCFSPLWVAFSILIGGLLLDVLISITFGVSALPVNIIIGVIIVLGLGTALRLALEFCHEWGLRRAGQRVESNVNHGYHPAV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00068 221 ProSiteProfiles Zinc finger RING-CH-type profile. 53 113 IPR011016 GO:0008270
Pral4346g00068 221 MobiDBLite consensus disorder prediction 1 33 - -
Pral4346g00068 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 117 IPR013083 -
Pral4346g00068 221 SMART ringv_2 60 107 IPR011016 GO:0008270
Pral4346g00068 221 PANTHER ZINC FINGER, RING-CH-TYPE 42 177 - -
Pral4346g00068 221 CDD RING_CH-C4HC3_MARCH 61 107 - -
Pral4346g00068 221 Pfam RING-variant domain 61 106 IPR011016 GO:0008270
Pral4346g00068 221 SUPERFAMILY RING/U-box 56 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00068 Pral-Chr4346 452863 458614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00068 58 113 C3H Transcription Factor Family AT2G37950 52.542 4.35e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00068 - - csav:115716936 298.13