Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00062 ATGCCACAGAACTCCATAGCACCAAAACCAGAACACTGCAGTAGGAGCCCTGTAGAAGAAGGAGCGCAAGAGATGTCAGAGCCCCATAACTCAATTGTCCTTCCCCACCCAGCACAAACCAATGAACAATCTTTGCCAAAACTGAATTTGTACCCAATTACCCTGAAGTTCGAGGAACTGGTTTACAAAGTTAAACTAGAGCAGAAAGGACAGTGTTGGGGCAGTTCATGGAAATCCAAGGAGAAGACCATATTGAATGGGATTACCGGTATGGTTTGCCCAGGAGAAATACTGGCTATGCTGGGACCCTCTGGCAGTGGGAAAACCACACTTCTGACAGCTCTTGGAGGCCGTCTCAATGGTAAATTATCTGGGAAGATCACATACAACAACCAGCCTTTCTCTGGTTCCATAAAGAGAAGAACTGGGTTTGTCGCTCAGGATGATGTTCTATACCCTCATCTAACTGTTTTTGAGACTCTATTGTTCACTGCACTTTTGAGGTTGCCTAACAGCTTGACCAGAGACGAAAAAGTTGAGCACGTAGAGCGGGTTATTGTTGAGTTAGGACTGACTCGGTGCAGGGGAAGCATGATAGGAGGCCCACTTTTCAGAGGAATATCAGGTGGAGAGAAAAAGAGGGTAAGCATAGGGCAGGAAATGCTCATCAATCCAAGCCTTTTGCTTCTAGATGAGCCCACCTCAGGTTTGGACTCTACCACAGCTCAGAGGATCCTAAACACAATCAAACGTCTGGCCAGTGGAGGTAGAACTGTTGTGACCACCATACACCAGCCATCTAGTCGTCTCTACTATATGTTTGATAAGGTAGTCCTGCTATCTGAAGGCTGCCCCATCTACAATGGCCCTGCTTCTACAGCCTTGGAGTACTTTTCATCCATTGGTTTTTCCACATCCATGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAATGGGATTGCCCCGGACTCCAAGAATTCAACTGAACAAAGTGAGAACCTGGAGCAAGAAAGGAAGCTAGTCAGGGAAGCACTAATTTCTGCTTATGACAAGAACATAGCAACAAGGTTGAAAACTGAGCTGTGCAGCTCGAATGTGAACTACAATATCACAAAAGATACTTCTGCAAAAAGTAACATAAAACCAGAGCAATGGTGCACAAGTTGGTGGTACCAATTCAAGGTACTGTTACAGAGGGGCCTAAGGGAGAGAAGGTATGAGACTTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACATTCAAGACCGGGTTGCCTTGATCTTTTTCTTCTCCGTTTTCTGGGGATTCTACCCTCTCTACAACGCAGTTTTCACATTTCCTCAGGAAAGAAGAATGCTGATCAAGGAACGGTCATCAGGAATGTACAGACTTTCATCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCGCTGGAGCTGGCTCTTCCAACCGCATTTGTCTTCATACTCTACTGGATGGGAGGGCTTAAACCTCATCCTATGACATTCATCCTTTCCCTTCTTGTGGTTCTTTACAGTGTACTTGTCTCTCAAAGTCTTGGCTTAGCCTTTGGAGCTATTCTTATGGAGATCAAGCAGGCCACAACCTTAGCTTCTGTCACAACCCTTGTATTTCTCATTGCTGGAGGATACTACGTACAACAAATCCCTCCCTTCATAGTGTGGTTCAAGTACTTGAGCTACAGCTACTATTGTTACAAACTTCTTCTCGGTGTCCAGTATAATGACAATGATGTTTATGAGTGCTCCAAGGGTGTTTTGTGTAGGGTTGGAGATTTTCCTCCGATCAAATCAATGGGTTTGAACCATTTGTGGGTTGATGTGGCCATTATGGCTTTGATGTTGGTAGCTTATCGACTTGTTGCTTACATAGCACTACATAGAGTGAGGTAA 1968 0.4482 MPQNSIAPKPEHCSRSPVEEGAQEMSEPHNSIVLPHPAQTNEQSLPKLNLYPITLKFEELVYKVKLEQKGQCWGSSWKSKEKTILNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVFETLLFTALLRLPNSLTRDEKVEHVERVIVELGLTRCRGSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYNGPASTALEYFSSIGFSTSMTVNPADLLLDLANGIAPDSKNSTEQSENLEQERKLVREALISAYDKNIATRLKTELCSSNVNYNITKDTSAKSNIKPEQWCTSWWYQFKVLLQRGLRERRYETFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALIFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFILYWMGGLKPHPMTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWFKYLSYSYYCYKLLLGVQYNDNDVYECSKGVLCRVGDFPPIKSMGLNHLWVDVAIMALMLVAYRLVAYIALHRVR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00062 655 CDD ABCG_EPDR 52 289 - -
Pral4346g00062 655 Coils Coil 326 346 - -
Pral4346g00062 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 648 - -
Pral4346g00062 655 Pfam ABC-2 type transporter 393 599 IPR013525 GO:0016020|GO:0140359
Pral4346g00062 655 MobiDBLite consensus disorder prediction 1 39 - -
Pral4346g00062 655 Pfam ABC-2 type transporter 264 365 IPR043926 GO:0140359
Pral4346g00062 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 307 IPR003439 GO:0005524
Pral4346g00062 655 FunFam ABC transporter G family member 22 72 301 - -
Pral4346g00062 655 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524|GO:0016887
Pral4346g00062 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 301 IPR027417 -
Pral4346g00062 655 Pfam ABC transporter 85 235 IPR003439 GO:0005524
Pral4346g00062 655 SMART AAA_5 94 284 IPR003593 GO:0016887
Pral4346g00062 655 Gene3D - 74 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00062 Pral-Chr4346 407912 410914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00062 84 283 Calmodulin-binding Proteins AT2G36910 29.327 1.21e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00062 K05681 - gmx:100780191 1135.94