Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00040 ATGAAAGATATGGAAGTGAGGAAGTTTGGGAGTGAGTTTTGCACAAAGCACAGCGAGGCAGAGCTGGTGGCGCCTGCAAAACCAACGCCATGTGAGACCAAGAAGCTATCAGACATAGACGACCAAGAGGGCCTTCGATTTCATCTTCCTCTTGTGATGTTCTTCAGAAATGATAATGAAGCTTCCATACTGGAAGGAAAGGACCCTGCCATGGTGATCAGAGAGGCCATAAGCCAAGCTCTGGTGTATTACTATCCACTCGCAGGCAGACTGAGAGAAGGAGAGAACAGAAAGCTCATGGTGGAGTGTAATGGAGAGGGCGTGTTGTTCCTGGAAGCTGATGCTGACGTGTCGCTTTTGGAGCTTGGGGATTCAATTCTGCCACCATGTCCGTATCTCAACCACTTCCTCCTTCCCTTGCCTGCCTCTGAAGCCATTCTTGGATGCCCTCTCTTGTTCTTTCAGGTAACTCGTCTTTCATGCGGAGGATTTGTGTTGGGCGTTTGGATGAATCACACAGTGTGCGACACACTCGGCCTTGTCCAATTCCTCAAAATGGTGTCTGAATTCGCAACGCACTCTCCTCTCTCTCAAATCCCTGTTTGGCAGAGACACCTTTTGTCTGCGCGACACCCACCTCGCATCACTTGTCTTCACCATGAGTACCACCAACCCATTTCACATCCCAACTCACAAACCTTACACTCCGATCCTGATAGCGAAACAGTTCACGAATCTTTCTTCTTCGGCCCCAAACACATCGCCTCACTGCGTAATCGTCTCCCCCATCACCTTCGGAATTGCTCAACTTTCGAGTTGCTCACTGCGTGTTTGTGGAAGTGCCGCACTGAAGCACTTGACCTGAAACCCAGCGAGATTGTGTCCATTTCACCCTTTATCACAGCTCGAGGTAAACGAGGCCTAGACTTGCCTGATGGGTATTACGGGAACGCCTTTGCCTTCCCAACTGCCATATCAGAAGCTGGATTGATCTGCAACAACCCCTTGGGGCACGCGTTGGGGTTGATCAGAGGGGTTAAAGCACAGATGAACAAAGAGTACTTGAGCTCCGTGGCTGATCTTATGGTGCTCAAGGGACGTCCTAAGTATAGAACGAATGGGAATTATCTTGTGGCTGATTCGAGTCGCGTGGAGTTTCACAAAGTGGACTTTGGGTGGGGAAAACCAGTCTATGGTGGGCCTGCTGGAGCCATACCATGTGTTAGCTTCTATGCTGCGTTCAGGAACATGAAAGGTGAGAATGGCATTGTGGTGCCAATTTTGCTGCCGCGCAAAGCCATGAGGAGGTTCCTTTCTGCGGTGGAGAAAATGACGAGTGAGAACGCTGTGGATGAATCTTATGATCATGGTATGGCGATGAAAACTATATCGAAGCTTTGA 1401 0.4954 MKDMEVRKFGSEFCTKHSEAELVAPAKPTPCETKKLSDIDDQEGLRFHLPLVMFFRNDNEASILEGKDPAMVIREAISQALVYYYPLAGRLREGENRKLMVECNGEGVLFLEADADVSLLELGDSILPPCPYLNHFLLPLPASEAILGCPLLFFQVTRLSCGGFVLGVWMNHTVCDTLGLVQFLKMVSEFATHSPLSQIPVWQRHLLSARHPPRITCLHHEYHQPISHPNSQTLHSDPDSETVHESFFFGPKHIASLRNRLPHHLRNCSTFELLTACLWKCRTEALDLKPSEIVSISPFITARGKRGLDLPDGYYGNAFAFPTAISEAGLICNNPLGHALGLIRGVKAQMNKEYLSSVADLMVLKGRPKYRTNGNYLVADSSRVEFHKVDFGWGKPVYGGPAGAIPCVSFYAAFRNMKGENGIVVPILLPRKAMRRFLSAVEKMTSENAVDESYDHGMAMKTISKL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00040 466 Gene3D - 12 223 IPR023213 -
Pral4346g00040 466 Gene3D - 224 441 IPR023213 -
Pral4346g00040 466 Pfam Transferase family 19 443 - -
Pral4346g00040 466 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00040 Pral-Chr4346 222829 225724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00040 19 437 Monolignol Biosynthesis Gene Families AT5G48930 28.637 8.77e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00040 - K19861 pcin:129322063 684.871