Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00037 ATGAAGCTTTCGTCTTCTTCTCCTCCTCCTTCCTCTTCTCACGTGCATGCATTCTGGTCCATATGTCTCCCTGTGGTTCTCTTTTCAGCCAACCTAATAGGGCTCCAACCTAGGATCACTGCCAGAGCATTAGGGAATGACACAGACCAGTTGACATTGTTCAAGTTTAAGGAAGCAATAGAAAGTGACCCATATAAAGTCCTGAACTCCTGGAATAGGTCTACTCACTTTTGCAGATGGCAAGGAATCACATGCAGCCTCAGACATCAAAGAGTCACATCCTTGAACCTTCAAGATTATAACTTGGCTGGGTTCATACCACCTGAGATTGGCAACCTTACGTTTTTTAGGTACATCAACCTTCAAAACAACAGCTTTTATGGTCAGATCCCACAAGAAATAGGTCGTCTGTATCGGCTGCAGCAACTATACCTGACAAATAACACTTTAAGGGGACAAATCCCGACCAACTTGTCTCAGTGTTCGCGATTGAGGACCTTGAGCTTGATGGGAAATGAACTAGTTGGAAAAATACCTCTGGAACTTGGCTTTCTGTCAAATTTGGAGCAGTTATATCTTGCTATGAACAATCTGACAGGTGAAATCCCACCTTCCATAGGAAACCTTTCTTCTTTAAGTATTCTTTCTTTGGGAATTAATAACTTGGAGGGAAGTGTGCCAGAAGAGATAGGCCTTTTGAAGAACTTGGCTCACATCTCTATTGCATCAAACAAGCTGTCTGGTATGCTTCCTTCTTCACTTTACAATATGTCATCGCTCACCTTTTTCTCAGCTGGAGCCAACCAGTTCAATGGATCTTTACCACCCAACATGTTCCTCACCCTACCAAATCTCCAACAATTTGGTATCGGGATGAACAAATTCTCAGGCACCATACCAAATTCCATTTCAAATGCAACCAGCATGCTGTTATTTAACATTCCAAGGAACAACTTTGTAGGACAGGTTCCAACCGGTATAGGCAACCTCAAAGATTTGTGGTCTCTGGCTATGGGTCGCAATTTTCTAGGAAATGGTTCAGACGCTGACTTGGATTTCTTGACATCTTTGACAAACTGCACCAAATTGCGGGTGTTGGAATTAAATTTGAACAATTTTGGAGGTTCTTTACCCAAATCTGTAGCCAATTTGTCAAGTCAATTGAGTCAGTTCTATATAGGTGGCAATCAGATTTCTGGGACTATACCTGTAGGATTAGGAAATCTCGTTAACTTGATTGCATTGGACTTGGAGCTCAACCATCTCCAAGGGTCTATTCCAGCTTCTTTTGGGAAGTTTCAGAAGATGCAGTCGTTGACTTTGAATGTGAACAAACTGTCAGGAGAGATCCCATTGTCCTTGGGCAACCTTGGTCAGTTGTTTCAACTTGACTTGTCACATAACATGCTAGAAGGAAGCATTCCTCCTAGTATTGAAAATTGCAAAAATTTACAGTACCTGGAACTTTCAGATAACAGCCTTGGTGGAGCTATTCCTTCTGAGATATTTGGACTTCCCTACTTATCATTGTTACTGAACTTATCTCACAACTCGTTTACTGGCGGCCTACCCATTGAGGTTGGCAACCTTAAAAGCATCAGTAAGTTAGATGTTTCTAGAAATGCTCTGTCTGGTGAAATTCCAGGAACAATTGCCCAATGCATAGTCTTGGAATACCTTAACTTAGAAGGGAATTCTTTCCAAGGAACCATACCTTCAACTCTTGCCTCATTGAGAGGCCTTCAATATTTAGATCTCTCTGAAAACAAGTTGTCCGGATCAATTCCAGAAGGTCTGGAGGATATTTCTGTTCTGTTGTACTTGAATGTTTCTTTCAATATGTTAGATGGAGAAGTACCAACTGGAGGTATCTTTCGAAACGCAAGTTCAATATCATTGGAAGGAAACAATGAACTCTGTGGGGGCATTACAACACTAAATCTACCACCATGCCCTGAAGAAGTTGTTGAGAAACATAACAAACTTCATGCTTGGAAGATAATATTAATAGTAATTTCTGGGGTTCTATTTCTTATTCTGTTATTATCCTTTGGTGTTGTGTACAGGAAGAGAAAAATAAGCCAAAGAAATTCTTCTACCTCACTCACAGTGGATGGAAACCAACTATCCAAGGTCTCTCATCAGACACTGCATAAGGCAACTGATGGCTTCTCTTCAAATAACTTGGTAGGATCCCGTGCTTTTGGCTTCGTATACAAGGGAAATTTTGAGTCAGAAGGTAGAGTTGTTGCTATAAAGGTTCTGAATCTTCAAAAGAAGGGAGCTAAGAAGGGTTTCGTTGCTGAATGTAATGCACTCAAAAACATCCGGCACAGAAATCTGGTTAAGATTTTAACATGTTGCTCTAGTACGGATTTCAAAGGCGATGAATTTAAAGCTTTAGTTTTTTAATACATGGAAAATGGAAGCTTGGAGAAATGGTTACATGCAGAGTTTGAAAGTGAAGATCAGTCAAGAACATTAGACCTTCTCCAAAGACTGAATATTGTCATTGATGTTAGTTCTGCACTAGAGTATCTTCGCCATGAAAATGAGCAGCAAATTGTTCATTGTGATTTGAAGCCAGGCAATGTCCTTCTTGACAATGACATGGTTGGTCATGTAGGTGACTTTGGATTAGCAAAGCTTATCTGGACTATTAATGGTATCTCTCAAAATCAAAGTAGCACAACTGGAATAAAGGGAACCATTGGCTATGCACCTCCAGAGTATGGAACGGGAGGTGAAGTTTCAACACAAGGTGATGTTTATAGCTTTGGGATTCTTTTATTGGAAATGCTTACTGGAAGAAGACCCACCGATGAAATGTTCACAGATGGTATTAATCTCCGTAAATATGTCAAGGTTGTCTTGCCAGATAAACTGTTACAAATAGTGGACCCTGCACTTCTCCTCAGAGAACTAAAACGAAAAGCTTCATCTGCCGAAGCAGAAAAACACAGGAATGATCAACTTAATCAGATTCCCATGGAGAAGTGCCTGCTTGAACTTTTTTATATTGGACTTGCTTGTTCAGCTGAATCACCCATAGAAAGAATGAATGTGAGGGATGTCACCAGAGAACTTGATCTAATAAAAAGTTCTTTCCTTCGTGGTAGAAAAATGGAGACTCGATACTAA 3141 0.4037 MKLSSSSPPPSSSHVHAFWSICLPVVLFSANLIGLQPRITARALGNDTDQLTLFKFKEAIESDPYKVLNSWNRSTHFCRWQGITCSLRHQRVTSLNLQDYNLAGFIPPEIGNLTFFRYINLQNNSFYGQIPQEIGRLYRLQQLYLTNNTLRGQIPTNLSQCSRLRTLSLMGNELVGKIPLELGFLSNLEQLYLAMNNLTGEIPPSIGNLSSLSILSLGINNLEGSVPEEIGLLKNLAHISIASNKLSGMLPSSLYNMSSLTFFSAGANQFNGSLPPNMFLTLPNLQQFGIGMNKFSGTIPNSISNATSMLLFNIPRNNFVGQVPTGIGNLKDLWSLAMGRNFLGNGSDADLDFLTSLTNCTKLRVLELNLNNFGGSLPKSVANLSSQLSQFYIGGNQISGTIPVGLGNLVNLIALDLELNHLQGSIPASFGKFQKMQSLTLNVNKLSGEIPLSLGNLGQLFQLDLSHNMLEGSIPPSIENCKNLQYLELSDNSLGGAIPSEIFGLPYLSLLLNLSHNSFTGGLPIEVGNLKSISKLDVSRNALSGEIPGTIAQCIVLEYLNLEGNSFQGTIPSTLASLRGLQYLDLSENKLSGSIPEGLEDISVLLYLNVSFNMLDGEVPTGGIFRNASSISLEGNNELCGGITTLNLPPCPEEVVEKHNKLHAWKIILIVISGVLFLILLLSFGVVYRKRKISQRNSSTSLTVDGNQLSKVSHQTLHKATDGFSSNNLVGSRAFGFVYKGNFESEGRVVAIKVLNLQKKGAKKGFVAECNALKNIRHRNLVKILTCCSSTDFKGDEFKALVFXYMENGSLEKWLHAEFESEDQSRTLDLLQRLNIVIDVSSALEYLRHENEQQIVHCDLKPGNVLLDNDMVGHVGDFGLAKLIWTINGISQNQSSTTGIKGTIGYAPPEYGTGGEVSTQGDVYSFGILLLEMLTGRRPTDEMFTDGINLRKYVKVVLPDKLLQIVDPALLLRELKRKASSAEAEKHRNDQLNQIPMEKCLLELFYIGLACSAESPIERMNVRDVTRELDLIKSSFLRGRKMETRY 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00037 1046 SMART LRR_typ_2 409 432 IPR003591 -
Pral4346g00037 1046 SMART LRR_typ_2 482 505 IPR003591 -
Pral4346g00037 1046 SMART LRR_typ_2 233 256 IPR003591 -
Pral4346g00037 1046 SMART LRR_typ_2 530 554 IPR003591 -
Pral4346g00037 1046 SMART LRR_typ_2 457 481 IPR003591 -
Pral4346g00037 1046 SMART LRR_typ_2 578 602 IPR003591 -
Pral4346g00037 1046 SMART LRR_typ_2 185 209 IPR003591 -
Pral4346g00037 1046 SMART LRR_typ_2 137 161 IPR003591 -
Pral4346g00037 1046 Pfam Leucine rich repeat N-terminal domain 47 86 IPR013210 -
Pral4346g00037 1046 PANTHER OS04G0122200 PROTEIN 232 1033 - -
Pral4346g00037 1046 Gene3D Ribonuclease Inhibitor 44 224 IPR032675 -
Pral4346g00037 1046 SMART serkin_6 724 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4346g00037 1046 SUPERFAMILY Protein kinase-like (PK-like) 701 1029 IPR011009 -
Pral4346g00037 1046 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 806 1042 - -
Pral4346g00037 1046 Pfam Leucine rich repeat 557 615 IPR001611 GO:0005515
Pral4346g00037 1046 Gene3D Transferase(Phosphotransferase) domain 1 806 1042 - -
Pral4346g00037 1046 Gene3D Phosphorylase Kinase; domain 1 684 805 - -
Pral4346g00037 1046 FunFam Inactive leucine-rich repeat receptor-like protein kinase 358 651 - -
Pral4346g00037 1046 ProSiteProfiles Protein kinase domain profile. 724 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4346g00037 1046 Gene3D Ribonuclease Inhibitor 449 660 IPR032675 -
Pral4346g00037 1046 SUPERFAMILY L domain-like 48 343 - -
Pral4346g00037 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672|GO:0006468
Pral4346g00037 1046 Gene3D Ribonuclease Inhibitor 279 353 IPR032675 -
Pral4346g00037 1046 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 164 357 - -
Pral4346g00037 1046 Coils Coil 972 992 - -
Pral4346g00037 1046 FunFam LRR receptor-like serine/threonine-protein kinase EFR 694 805 - -
Pral4346g00037 1046 Pfam Protein tyrosine and serine/threonine kinase 728 944 IPR001245 GO:0004672|GO:0006468
Pral4346g00037 1046 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 48 159 - -
Pral4346g00037 1046 Gene3D Ribonuclease Inhibitor 354 448 IPR032675 -
Pral4346g00037 1046 Gene3D Ribonuclease Inhibitor 225 278 IPR032675 -
Pral4346g00037 1046 SUPERFAMILY L domain-like 387 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00037 Pral-Chr4346 200773 204048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00037 46 1045 Receptor kinase-like Gene Family AT3G47570 45.986 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4346g00037 PK_Tyr_Ser-Thr 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00037 - - qsa:O6P43_025027 1345.1