Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00036 ATGAAGCATAATGTGTGTGATCAGAATAAAGAAAACGATAGTAATGTTACATACTCCAATGGGGATGAAACAGATGCAGATGAGGTGATATCAGAGTCTTTCAGAAAGATTAAATCTGATAAAATGCGATGTATCTCTCCTAATGTCCACCTTGATGAGTGGAGTCAAACAAGCATTTCTAACACTGCATCTAGAGCTGGTAGCAGTTCTGATCATCCAGCTTCAACTCAGTCTTTGAACCCTTCAAGTCGACTCCTTTCTCGGTTTAGCCTTATTCCTGGCAACGTAAGCTTCAGACTAAGCAGAACCACAAGTTTGGGGTCATCACGGCCTTGCCCTGTTTCTTCTGCAGGTCTCTCAATGTTTAACAATGAAGATGACCTTAATCCACAGCCTGGACCAACTTGTAGCTTTGCTAATCAAAATGAAGCTCTACAATGCAGTGACTTGCTTCCTGCATCACATTGCTATGAAGACACTCCTATTAATTTAAGGTCTAACAACCCTTCATCAGATTCCTATGGCACCTTGCAGAGCAATTCAACAAATTCTTCTATGCAGAGTATGAGTAGAGATGAAGATGGTGCAAGAGAAGCGTTAAATCTTAACTTATTTTCTCCAAGAATTCATGCCAGAACTGAAAATGTTGAGATGAGACATAACGATCGCCGAAGTGGAGCTCGAGAACCTGTTGAACGGAATGTTCGCTTTAGTCGTACTCTGAGTGTTGGAAGGCTTCGTGATAGGGTCCTTCGTAGATCAACAATATCAGACTTCACTTTTTGCCCACTGCAACAAGAAAGGGATGCAACAGATGCTGGTCAAGATATTGGAAGACAAGCAGGGGAGAGAGAGTCAAGAGTGCTCCCATCTGATAGTGACTCTACAAGTTCCCCCTCTACATCTGGATATCCTCCATCCAACATGTCTAGCTCCTTGTTTGGGATCCAAGACTATGAGATCGAGTCTTCACGATCAAGAGAACCTAGGTATCGTGATCTGCTGGAAAACAGATCCAATTTCCTGGAACGGAGAAGAAGAATACGGTCCCAGGTCCGTGCTCTTCAACGATTGGGCAGCCGATTTGAAAACCTGTCTGGGCATGACAGGTCATGTATTTTATCCGGCCAACATAGAAATGGTCGTTGTACATGCCGTAGTAGTGGTCGTGATGCCAATTCAAATGATGATACTGGGGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCAGTGGTTTTATCTTCCCGCCCTTCTGTTTCTTCTATTGGATCTGTTCCTGCACCTTATGAAGTTGTAGAATCCTTGCCTGTCAAATTATACACAAAGTTGCATAAACATCAAGAGGATGCTGCTCAATGCTATATATGCCTTGTGGAATATGAGGATGGAGACAACATGCGAGTACTACCTTGTCATCATGAATTTCATTTAACATGCATAGACAAGTGGCTAAAGGAGATTCACAGGGTATGCCCATTGTGCCGTGGGGACATCTGCATTGCTGATTCGATACCTACCGAGAACTGA 1572 0.43 MKHNVCDQNKENDSNVTYSNGDETDADEVISESFRKIKSDKMRCISPNVHLDEWSQTSISNTASRAGSSSDHPASTQSLNPSSRLLSRFSLIPGNVSFRLSRTTSLGSSRPCPVSSAGLSMFNNEDDLNPQPGPTCSFANQNEALQCSDLLPASHCYEDTPINLRSNNPSSDSYGTLQSNSTNSSMQSMSRDEDGAREALNLNLFSPRIHARTENVEMRHNDRRSGAREPVERNVRFSRTLSVGRLRDRVLRRSTISDFTFCPLQQERDATDAGQDIGRQAGERESRVLPSDSDSTSSPSTSGYPPSNMSSSLFGIQDYEIESSRSREPRYRDLLENRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRSSGRDANSNDDTGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPYEVVESLPVKLYTKLHKHQEDAAQCYICLVEYEDGDNMRVLPCHHEFHLTCIDKWLKEIHRVCPLCRGDICIADSIPTEN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00036 523 MobiDBLite consensus disorder prediction 280 312 - -
Pral4346g00036 523 SMART ring_2 468 509 IPR001841 -
Pral4346g00036 523 FunFam Putative RING zinc finger domain superfamily protein 437 515 - -
Pral4346g00036 523 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 432 514 IPR013083 -
Pral4346g00036 523 MobiDBLite consensus disorder prediction 1 29 - -
Pral4346g00036 523 MobiDBLite consensus disorder prediction 10 24 - -
Pral4346g00036 523 ProSiteProfiles Zinc finger RING-type profile. 468 510 IPR001841 -
Pral4346g00036 523 SUPERFAMILY RING/U-box 446 516 - -
Pral4346g00036 523 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 522 - -
Pral4346g00036 523 MobiDBLite consensus disorder prediction 162 195 - -
Pral4346g00036 523 MobiDBLite consensus disorder prediction 291 312 - -
Pral4346g00036 523 MobiDBLite consensus disorder prediction 162 190 - -
Pral4346g00036 523 MobiDBLite consensus disorder prediction 60 81 - -
Pral4346g00036 523 Pfam Ring finger domain 467 510 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00036 Pral-Chr4346 194003 197264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00036 186 517 C3H Transcription Factor Family AT5G45290 58.140 2.33e-114 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00036 - - gmx:100786091 715.301