Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00035 ATGCGATGTATCTCTCCTAATGTCCACCTTGATGAGTGGAGTCAAACAAGCATTTCTAACACTGCATCTAGAGCTGGTAGCAGTTCTGATCATCCAGCTTCAACTCAGTCTTTGAACCCTTCAAGTCGACTCCTTTCTCGGTTTAGCCTTATTCCTGGCAACGTAAGCTTCAGACTAAGCAGAACCACAAGTTTGGGGTCATCACGGCCTTGCCCTGTTTCTTCTGCAGGTCTCTCAATGTTTAACAATGAAGATGACCTTAATCCACAGCCTGGACCAACTTGTAGCTTTGCTAATCAAAATGAAGCTCTACAATGCAGTGACTTGCTTCCTGCATCACATTGCTATGAAGACACTCCTATTAATTTAAGGTCTAACAACCCTTCATCAGATTCCTATGGCACCTTGCAGAGCAATTCAACAAATTCTTCTATGCAGAGTATGAGTAGAGATGAAGATGGTGCAAGAGAAGCGTTAAATCTTAACTTATTTTCTCCAAGAATTCATGCCAGAACTGAAAATGTTGAGATGAGACATAACGATCGCCGAAGTGGAGCTCGAGAACCTGTTGAACGGAATGTTCGCTTTAGTCGTACTCTGAGTGTTGGAAGGCTTCGTGATAGGGTCCTTCGTAGATCAACAATATCAGACTTCACTTTTTGCCCACTGCAACAAGAAAGGGATGCAACAGATGCTGGTCAAGATATTGGAAGACAAGCAGGGGAGAGAGAGTCAAGAGTGCTCCCATCTGATAGTGACTCTACAAGTTCCCCCTCTACATCTGGATATCCTCCATCCAACATGTCTAGCTCCTTGTTTGGGATCCAAGACTATGAGATCGAGTCTTCACGATCAAGAGAACCTAGGTATCGTGATCTGCTGGAAAACAGATCCAATTTCCTGGAACGGAGAAGAAGAATACGGTCCCAGGTCCGTGCTCTTCAACGATTGGGCAGCCGATTTGAAAACCTGTCTGGGCATGACAGGTCATGTATTTTATCCGGCCAACATAGAAATGGTCGTTGTACATGCCGTAGTAGTGGTCGTGATGCCAATTCAAATGATGATACTGGGGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCAGTGGTTTTATCTTCCCGCCCTTCTGTTTCTTCTATTGGATCTGTTCCTGCACCTTATGAAGTTGTAGAATCCTTGCCTGTCAAATTATACACAAAGTTGCATAAACATCAAGAGGATGCTGCTCAATGCTATATATGCCTTGTGGAATATGAGGATGGAGACAACATGCGAGTACTACCTTGTCATCATGAATTTCATTTAACATGCATAGACAAGTGGCTAAAGGAGATTCACAGGGTATGCCCATTGTGCCGTGGGGACATCTGCATTGCTGATTCGATACCTACCGAGAACTGA 1449 0.4382 MRCISPNVHLDEWSQTSISNTASRAGSSSDHPASTQSLNPSSRLLSRFSLIPGNVSFRLSRTTSLGSSRPCPVSSAGLSMFNNEDDLNPQPGPTCSFANQNEALQCSDLLPASHCYEDTPINLRSNNPSSDSYGTLQSNSTNSSMQSMSRDEDGAREALNLNLFSPRIHARTENVEMRHNDRRSGAREPVERNVRFSRTLSVGRLRDRVLRRSTISDFTFCPLQQERDATDAGQDIGRQAGERESRVLPSDSDSTSSPSTSGYPPSNMSSSLFGIQDYEIESSRSREPRYRDLLENRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRSSGRDANSNDDTGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPYEVVESLPVKLYTKLHKHQEDAAQCYICLVEYEDGDNMRVLPCHHEFHLTCIDKWLKEIHRVCPLCRGDICIADSIPTEN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00035 482 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 481 - -
Pral4346g00035 482 MobiDBLite consensus disorder prediction 121 154 - -
Pral4346g00035 482 MobiDBLite consensus disorder prediction 250 271 - -
Pral4346g00035 482 MobiDBLite consensus disorder prediction 121 149 - -
Pral4346g00035 482 ProSiteProfiles Zinc finger RING-type profile. 427 469 IPR001841 -
Pral4346g00035 482 MobiDBLite consensus disorder prediction 19 40 - -
Pral4346g00035 482 FunFam Putative RING zinc finger domain superfamily protein 396 474 - -
Pral4346g00035 482 Pfam Ring finger domain 426 469 IPR001841 -
Pral4346g00035 482 MobiDBLite consensus disorder prediction 239 271 - -
Pral4346g00035 482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 391 473 IPR013083 -
Pral4346g00035 482 SUPERFAMILY RING/U-box 405 475 - -
Pral4346g00035 482 SMART ring_2 427 468 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00035 Pral-Chr4346 193675 197264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00035 145 476 C3H Transcription Factor Family AT5G45290 58.140 1.87e-114 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00035 - - gmx:100786091 666.381