Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00034 ATGGTTGTGTCTATATTATCTGGTCAGGTGTGTGATCAGAATAAAGAAAACGATAGTAATGTTACATACTCCAATGGGGATGAAACAGATGCAGATGAGGTGATATCAGAGTCTTTCAGAAAGATTAAATCTGATAAAATGCGATGTATCTCTCCTAATGTCCACCTTGATGAGTGGAGTCAAACAAGCATTTCTAACACTGCATCTAGAGCTGGTAGCAGTTCTGATCATCCAGCTTCAACTCAGTCTTTGAACCCTTCAAGTCGACTCCTTTCTCGGTTTAGCCTTATTCCTGGCAACGTAAGCTTCAGACTAAGCAGAACCACAAGTTTGGGGTCATCACGGCCTTGCCCTGTTTCTTCTGCAGGTCTCTCAATGTTTAACAATGAAGATGACCTTAATCCACAGCCTGGACCAACTTGTAGCTTTGCTAATCAAAATGAAGCTCTACAATGCAGTGACTTGCTTCCTGCATCACATTGCTATGAAGACACTCCTATTAATTTAAGGTCTAACAACCCTTCATCAGATTCCTATGGCACCTTGCAGAGCAATTCAACAAATTCTTCTATGCAGAGTATGAGTAGAGATGAAGATGGTGCAAGAGAAGCGTTAAATCTTAACTTATTTTCTCCAAGAATTCATGCCAGAACTGAAAATGTTGAGATGAGACATAACGATCGCCGAAGTGGAGCTCGAGAACCTGTTGAACGGAATGTTCGCTTTAGTCGTACTCTGAGTGTTGGAAGGCTTCGTGATAGGGTCCTTCGTAGATCAACAATATCAGACTTCACTTTTTGCCCACTGCAACAAGAAAGGGATGCAACAGATGCTGGTCAAGATATTGGAAGACAAGCAGGGGAGAGAGAGTCAAGAGTGCTCCCATCTGATAGTGACTCTACAAGTTCCCCCTCTACATCTGGATATCCTCCATCCAACATGTCTAGCTCCTTGTTTGGGATCCAAGACTATGAGATCGAGTCTTCACGATCAAGAGAACCTAGGTATCGTGATCTGCTGGAAAACAGATCCAATTTCCTGGAACGGAGAAGAAGAATACGGTCCCAGGTCCGTGCTCTTCAACGATTGGGCAGCCGATTTGAAAACCTGTCTGGGCATGACAGGTCATGTATTTTATCCGGCCAACATAGAAATGGTCGTTGTACATGCCGTAGTAGTGGTCGTGATGCCAATTCAAATGATGATACTGGGGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCAGTGGTTTTATCTTCCCGCCCTTCTGTTTCTTCTATTGGATCTGTTCCTGCACCTTATGAAGTTGTAGAATCCTTGCCTGTCAAATTATACACAAAGTTGCATAAACATCAAGAGGATGCTGCTCAATGCTATATATGCCTTGTGGAATATGAGGATGGAGACAACATGCGAGTACTACCTTGTCATCATGAATTTCATTTAACATGCATAGACAAGTGGCTAAAGGAGATTCACAGGGTATGCCCATTGTGCCGTGGGGACATCTGCATTGCTGATTCGATACCTACCGAGAACTGA 1587 0.4304 MVVSILSGQVCDQNKENDSNVTYSNGDETDADEVISESFRKIKSDKMRCISPNVHLDEWSQTSISNTASRAGSSSDHPASTQSLNPSSRLLSRFSLIPGNVSFRLSRTTSLGSSRPCPVSSAGLSMFNNEDDLNPQPGPTCSFANQNEALQCSDLLPASHCYEDTPINLRSNNPSSDSYGTLQSNSTNSSMQSMSRDEDGAREALNLNLFSPRIHARTENVEMRHNDRRSGAREPVERNVRFSRTLSVGRLRDRVLRRSTISDFTFCPLQQERDATDAGQDIGRQAGERESRVLPSDSDSTSSPSTSGYPPSNMSSSLFGIQDYEIESSRSREPRYRDLLENRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRSSGRDANSNDDTGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPYEVVESLPVKLYTKLHKHQEDAAQCYICLVEYEDGDNMRVLPCHHEFHLTCIDKWLKEIHRVCPLCRGDICIADSIPTEN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00034 528 MobiDBLite consensus disorder prediction 167 200 - -
Pral4346g00034 528 MobiDBLite consensus disorder prediction 167 195 - -
Pral4346g00034 528 MobiDBLite consensus disorder prediction 296 317 - -
Pral4346g00034 528 FunFam Putative RING zinc finger domain superfamily protein 442 520 - -
Pral4346g00034 528 ProSiteProfiles Zinc finger RING-type profile. 473 515 IPR001841 -
Pral4346g00034 528 MobiDBLite consensus disorder prediction 65 86 - -
Pral4346g00034 528 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 437 519 IPR013083 -
Pral4346g00034 528 SMART ring_2 473 514 IPR001841 -
Pral4346g00034 528 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 527 - -
Pral4346g00034 528 MobiDBLite consensus disorder prediction 285 317 - -
Pral4346g00034 528 Pfam Ring finger domain 472 515 IPR001841 -
Pral4346g00034 528 SUPERFAMILY RING/U-box 451 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00034 Pral-Chr4346 193332 197264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00034 191 522 C3H Transcription Factor Family AT5G45290 58.140 3.43e-114 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00034 - - gmx:100786091 717.227