Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00021 ATGAAGCAGCCATCCAAGTCGAAGCCATGGAGGCCACTCACTGCAAACTGCTGCTCCACTGAGAAACAAACCAAGCTCGGCAACTTCAGTCGATGCAAGCCGACTTCACGGTCGGATTTGTCCAAGGATGTCGCTTCGATGCCGTCGTTCCGGAGGCTGTCGTTCTCTGATCTGAGCCAGTCGTCGTCGATGAGAATCAACGAGGATCTGGCGCTGTCGTTCGGGTCGGATCTGCTCGATTTTCAGCTGAGCGAGCTGCGAGCCATAACGCAGAATTTCTCGAGCAATTTCTTGTTGGGAGAAGGAGGGTTCGGGACTGTGCACAAGGGCTACATCGATGATCATTTCCGGCAGGGCTTGAAGGCTCAGCCCGTCGCCGTCAAACTTCTCGACATCGAAGGCTTGCAAGGACATCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGTCAGCTAAGGCACCCAAACTTAGTGAAGTTGATAGGATATTGTTGTGAGGAAGAAGAACGGCTCCTTGTCTACGAGTTCATGCCAAGAGGAAGCTTAGAGAATCACTTGTTCAGAAGGATATCATCACTGCCTTGGGCAACTAGATTGAAAATTGCAATCGGTGCCGCTAAAGGCCTTTCCTTCTTGCATGGGGCAGAGAATCCAGTTATTTACAGGGACTTCAAAACTTCCAATGTCTTGCTTGATTCTGACTTCACAGCAAAGTTGTCAGATTTTGGATTAGCAAAAATGGGGCCAGAGGGATCTAAATCTCACGTCACAACCAGAGTCATGGGTACTTATGGATATGCAGCCCCTGAATACATCTCTACCGGTCACTTAACCACAAAAAGCGATGTCTATAGCTTTGGGGTGGTGCTGCTAGAACTACTCACAGGAAGGAGAGCAATGGAGAAGACAAGACCAAAGACTGAGCAGAGCCTTGTGGATTGGTCAAGACCCTATCTGAGTAGTTCTAGGAAGTTGAGGTATATTATGGATCCAAGGCTTGCAGGGCAGTACTCTGTGAAGGGCGCAAAGGAGATGGCTCGTTTGGCACTTCAATCCATAAGTCTGAATCCAGACAGGCCAAGGATGCCAACCATAGTTGAAATTCTTGAAAACTTGCAGCAGTTCAAGGACATGGCTATTACGTGTGGACACTGGCCTGCTTCAGCAAAATCTAGAAATGGAGCTTCTGATAAGATCAAAATTGATATCAGAGTTGGTGCAAACCACAGGAAGCCCTCTCCTGTAGTTGCAAGCAAAAAAACTTGA 1263 0.4798 MKQPSKSKPWRPLTANCCSTEKQTKLGNFSRCKPTSRSDLSKDVASMPSFRRLSFSDLSQSSSMRINEDLALSFGSDLLDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDHFRQGLKAQPVAVKLLDIEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWATRLKIAIGAAKGLSFLHGAENPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQSLVDWSRPYLSSSRKLRYIMDPRLAGQYSVKGAKEMARLALQSISLNPXDRPRMPTIVEILENLQQFKDMAITCGHWPASAKSRNGASDKIKIDIRVGANHRKPSPVVASKKT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00021 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pral4346g00021 421 Gene3D Phosphorylase Kinase; domain 1 55 175 - -
Pral4346g00021 421 CDD STKc_IRAK 99 372 - -
Pral4346g00021 421 FunFam Serine/threonine-protein kinase PBS1 176 382 - -
Pral4346g00021 421 Pfam Protein tyrosine and serine/threonine kinase 99 368 IPR001245 GO:0004672|GO:0006468
Pral4346g00021 421 Gene3D Transferase(Phosphotransferase) domain 1 176 383 - -
Pral4346g00021 421 SUPERFAMILY Protein kinase-like (PK-like) 75 370 IPR011009 -
Pral4346g00021 421 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Pral4346g00021 421 FunFam Serine/threonine-protein kinase BIK1 54 175 - -
Pral4346g00021 421 PANTHER OS01G0588500 PROTEIN-RELATED 59 373 - -
Pral4346g00021 421 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00021 Pral-Chr4346 136917 140293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00021 81 411 Glycoside Hydrolase AT3G07070 48.060 2.64e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4346g00021 PK_Tyr_Ser-Thr 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00021 - - lang:109333209 711.835