Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00019 ATGGGCATTTGTCTGATGAAATGGCAATGGCCATGGCTTGTTAATGTTTTGCTGATATGTATTGTAATCACGAAAAATGAAGCCATCAGTCCCGATGGTGAGGCGCTTCTCAGTTTCAAGGCAGCAGTTGTTAGCTCAGATGGTATCTTGTCACAATGGAGGCCTGAGGATTCTGACCCATGCAAATGGAGAGGAGTGAAGTGCGATCCAAAATCCAAAAGAGTTACAACTCTGAGTTTAGCTCGCCACAAGTTGAGTGGATCTATATCACCTGACCTTGGGAGGCTAGAGCATTTGACTATTCTTGCCCTTCACAACAACAATTTCTATGGGACAATTCCATCTGAATTGGGAAATTGCACCGACTTGCAGAGAATATTCTTGCAGGGCAATTACCTTAGTGGAGCGATTCCAAATGAACTAGGAAACCTATCACAGCTCAGAAGTTTGGATATATCAAGTAACTCCCTCAGTGGGAATATACCTCCATCACTTGGGAAATTGTATAATCTCAAAAATTTTAATGTTTCAACCAATTTTCTGGTCGGACCAATACCGTCTGATGGTGTGCTTGCTAACTTTACAGTAGACTCCTTTGTTGGTAATCGTGGTTTATGTGGAGTGCAAATCAATGTAATGTGTAAGGATGGTTCACCTGCAAATCAATCCTCAACCTTGGATCAAAACCAAAATGGAAAGAAGAAATATTCTGGCCGGTTGCTTATCAGTGCATCAGCAACTGTTGGTGCGCTTCTTTTAGTGGCACTCATGTGCTTCTGGGGTTGCTTTCTTTACAAGAAGTTTGGTAAAAACGACCAAAAAAGTCTGGCGATGGATGTTGGTGGAGGAGCTTCAATTGTAATGTTTCATGGAGATCTACCATATTCTTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACGTAATTGGATGTGGGGGATTTGGTACAGTTTACAAGCTTGCAATGGATGACGGGAATCAATTTGCTTTGAAGAGGATTGTTAAGTTGAATGAGGGTTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGAAGCATAAAACACCGTTATCTAGTAAACTTAAGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTACCTACCCCGTGGAAGTCTTGACGAAGTTCTTCATGAAAAATCTGAGCAGCTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCCTATTTGCACCATGATTGTTCCCCAAGGGTCATACACCGCGACATAAAGTCAAGCAATATTTTACTTGATGGCAACCTGGATGCTCGAGTCTCTGATTTTGGGCTTGCCAAACTTCTGGAGGATGAAGAATCTCATATTACCACCATTGTTGCTGGAACATTTGGATATCTAGCCCCCGAGTACATGCAAAGTGGTAGGGCAACTGAAAAAACTGACGTTTACAGTTTTGGTGTCTTGGTACTTGAAGTGCTAAGTGGGAAGCGTCCAACAGATGCGTCGTTCATTGAAAAGGGTCTAAATATTGTTGGTTGGCTGAATTTTCTCGTTACCGAAAATAGGCAAAGAGAGATTGTTGATCCCTTATGTGAGGGAGTGCAAGTAGAGAGTCTCGATGCCTTGCTCTCTGTAGCTATTCAGTGTGTTTCTTCAAGTCCAGAGGATCGACCCACCATGCATCGAGTAGTCCAGGTGCTTGAATCAGAGGTCATGACCCCATGCCCAAGTGATTTTTACGACACCGAGTAG 1773 0.4213 MGICLMKWQWPWLVNVLLICIVITKNEAISPDGEALLSFKAAVVSSDGILSQWRPEDSDPCKWRGVKCDPKSKRVTTLSLARHKLSGSISPDLGRLEHLTILALHNNNFYGTIPSELGNCTDLQRIFLQGNYLSGAIPNELGNLSQLRSLDISSNSLSGNIPPSLGKLYNLKNFNVSTNFLVGPIPSDGVLANFTVDSFVGNRGLCGVQINVMCKDGSPANQSSTLDQNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDQKSLAMDVGGGASIVMFHGDLPYSSKDIIKKLETLNEEHVIGCGGFGTVYKLAMDDGNQFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPRGSLDEVLHEKSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRVIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLVTENRQREIVDPLCEGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQVLESEVMTPCPSDFYDTE 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00019 590 ProSitePatterns Protein kinases ATP-binding region signature. 313 339 IPR017441 GO:0005524
Pral4346g00019 590 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 281 382 - -
Pral4346g00019 590 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Pral4346g00019 590 SUPERFAMILY Protein kinase-like (PK-like) 291 574 IPR011009 -
Pral4346g00019 590 SMART serkin_6 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4346g00019 590 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Pral4346g00019 590 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Pral4346g00019 590 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Pral4346g00019 590 Gene3D Transferase(Phosphotransferase) domain 1 383 581 - -
Pral4346g00019 590 SUPERFAMILY L domain-like 30 193 - -
Pral4346g00019 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Pral4346g00019 590 Pfam Protein kinase domain 309 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4346g00019 590 Gene3D Phosphorylase Kinase; domain 1 281 382 - -
Pral4346g00019 590 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 73 575 - -
Pral4346g00019 590 ProSiteProfiles Protein kinase domain profile. 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4346g00019 590 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 383 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00019 Pral-Chr4346 118108 125657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00019 1 583 Receptor kinase-like Gene Family AT2G35620 74.658 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pral4346g00019 Pkinase 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00019 - - gmx:100819230 1045.42