Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4346g00011 ATGGCCGACGATGGTCCTCCTCTCTTCAGCACCAACGTCTCCGTCGTACTCATCGCCGTGGGCTCCGCCGCCTTCGTCGTCACAATGTACCATCTACTTGCTGTTTGCTTCTGCGGCCACCAACTGACAGACCCTAACTCTGGCCAGCCGACTCCCGCCACCGGAGTAACTCCGCCGGCTTCGAGCATCATCGACGAGAGTTCGTTGGCGGAGCTAATTCCGGCACACAAGTACGAGAAGAAGATCGACGATAATGACTTGGAAGGTGCTCGCGAGGTGACCTGTGCGGTTTGCTTGGGAGATTTCGAGGAAGGCGAAGAGGTGAGAACATTGCCGGAGTGCTCGCACTCTTTTCATGTTCCTTGCATAGATATGTGGCTCTTCTCTCGCCTGAATTGTCCCGTCTGCCGCGCCGATGCCAAGCCGTCTCCGGTGGTTCTGAGCACCGTGTCGGAGTCCGTTCCCGGTGAATCGAATTCGAACGCGAATGACCACCGGATAGATATTGTGCAAAATGCTTTGGTCCACAGTGTCATGTTGCGACGGTGA 549 0.561 MADDGPPLFSTNVSVVLIAVGSAAFVVTMYHLLAVCFCGHQLTDPNSGQPTPATGVTPPASSIIDESSLAELIPAHKYEKKIDDNDLEGAREVTCAVCLGDFEEGEEVRTLPECSHSFHVPCIDMWLFSRLNCPVCRADAKPSPVVLSTVSESVPGESNSNANDHRIDIVQNALVHSVMLRR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4346g00011 182 SMART ring_2 95 136 IPR001841 -
Pral4346g00011 182 SUPERFAMILY RING/U-box 76 142 - -
Pral4346g00011 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 144 IPR013083 -
Pral4346g00011 182 CDD RING-H2_EL5-like 95 137 - -
Pral4346g00011 182 Pfam Ring finger domain 94 137 IPR001841 -
Pral4346g00011 182 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Pral4346g00011 182 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 140 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4346g00011 Pral-Chr4346 69581 70205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4346g00011 44 154 C3H Transcription Factor Family AT3G10910 39.474 2.63e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4346g00011 - - aip:107639941 173.711