Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4344g00031 ATGGCAATTACAGGTCCTAATCTTCTTTTTTTTCTCTATTTTGGCTCTGTCGAATTTACCTCCATGAAGAACAAACTTCGTCTTCTTCATCCAAACATGAGCTTCAATCATACGGCTTCTGTATCATCATGGACCACCATCTTCTTCCTCTGTTTACCCCTGCTTTACGCTTCCACACTTGCTTCTTTTTACGCCCCCGATGATCTTTTAAGCATTAACTGTGGCAGCTCCGGCAACTCAACGGGAAGTGGTCGGACATGGGCGGGAGACAACGATTCAAAGTTCTTATCCAAACAAGACGAATCTGTTCCAGCCACGGCACTTACTCAATCTCCTTCTGCCCAACAAGTCCCCTACACCACGGCTCGTCTCTCTCGCTCTCAGATCTCATATTCGTTCCCTGTCTCTCCAGGCCAGAAATTCCTTCGTCTCTTCTTTTACCCAGCTTCGTACCCGGCTTTTGATCGTTTCGATGCCTTCTTCACTGTCAAATCTGGCGGGTTCACACTCCTTAAGGATTTCAATGCTTCGGTCACGGCCGATGCTCACCGTGAAGATACCATCTTCATAGAATATTGCGTCAACGTCGGGGATGGCGAGAGGCTCAACTTAACTTTCACTCCCACTTCAACACACCCAGGTTCTTATGCGTTTGTTAATGGAATTGAGATTGTCTCCATGCCTGAAGATCTCTATTACACCAAACCTGACGACCTAGGATTCAAATTAATTGGGTCGGTGGCCGGGTTCAGCATCTCCGACAGCGTTGCTCTTCAGACAGAGTACAGGCTAAACGTCGGTGGCAGAATTATCTCAGCTACGAAAGACACGGGAATGCTCCGATATTGGGACAGCGATGACAGTTTCTCTGTTAAAAGTTATTTTTCACCCGCTGATTTTGAAGGTGAGAGAAGACCCCTGATGTTCACTAAAGTTCCTAATTACACAGCACCTGAGGAACTCTATCGAACAGAACGCGATATGCGAATGAACAAGACTTTGAACATGAACACTAACCTTACTTGGGAGTTTCCCGTCGATTCAGGCTTTACCTACATGCTGAGACTCCATTTTTGTGAGCTTAATCCAGATATCAACATTTCCTACAACAGGATATTTGATATTTACATAGCCGACCAGTCAGCCGACCATGGTGCGAATATTTTAAATTGGGCAAAGGGAAAAGGAGTTCCGGTATATAGAGACTATGCCGTCATTGTTTCAGGTGATGCAAAACCAGCTTCTCTTTCACTCAAAATGCATCCTGATTTGCAATCACAGTTGGAGTACAACGACGCGTTCTTAAATGGGCTTGAAATTTTCAAGATCAGTGATTCACAAAGTAATCTCGCCGGACCTAACCCTGATCCTCTTCCACCACCCCTTCCCAATGCTAATGATCTACCCCAAAAACAAGCAAGAAAAAACAGGAGAAACATTTTAATCGGTGTCATCGTCGGCGTTCCAGCTTCCATTATGGTTCTGATTTCCTGTACCGTATTCTTCCTCATCACTCGTGGGAAGAACATCAAGTCGAGTGATGGAACTTCTAAGTGTATTACTAATGGCTCACTTGTACCGGCGGAATTGTGCCATCGCTTTTCCATTGCTGAGGTCAGAGCCGCCACCAACAACTTTGATGAACTCTTCATCATCGGCGTCGGAGGATTCGGCAACGTCTACAAAGGTAACATTAACGACGGTCAAACTCCGGTTGCAGTCAAACGACTCAAACAAGGGTCGCAGCAAGGGCTCCATGAGTTCCGAACAGAGATTGAAATGTTGTCCCAACTTCGTCACAATCACTTAGTATCTCTCGTTGGCTACTGCAACGATGGCAACGAAATGATCCTTGTCTACGATTTCATGGCTCGAGGGACCCTACGTGACCATCTCTACGAGTCTGATCAGCTCCCACTTTCTTGGCATCAAAGGCTGGAGATTTGCCTGGGTGCGGCACGAGGTCTGCACTATTTACATACAGGTGCAAAACACGCTATCATTCATCGTGACATCAAGTCAACAAATATCCTCATAGATGAGAATTGGACGGCCAAGATCTCAGATTTCGGACTCTCCAAAATCGGACCCCCAGGAATCACGAGATCCAACATTAACATAAGCACAGTAGTTAAAGGAAGCATTGGATACTTGGATCCAGAATACTACATGTGTCAAAGGTTGACAGAAAAGTCAGATGTGTATTCTTTTGGAGTGGTCCTTCTGGAGGTATTGTGTGGAAGGCCTCCTATCATTCGTACAGTGGAGAGACAGCAACAAAACCTAGTAGAGTGGGTTCGGAGATGTGTTCGTGAGAATAAGATTTATGAAACGGTGGATCCATTCATCAAGGAAAGTATAATGCCCGAAAGCTTGAAGGAATACATGGGGATTGCTTTACAGTGCTTAGATGATGATGGCAATGAACGGCCGTCCATAGGCGATGTGATGTTGGGCCTCGAGTCTGCGATGGAGACGCTGAACAGTGCAAAGATGGCAGAGCTTGGTGGGGCTCTAAATGAAGATATTACTCCCTCCCATCCTAAATAA 2550 0.4565 MAITGPNLLFFLYFGSVEFTSMKNKLRLLHPNMSFNHTASVSSWTTIFFLCLPLLYASTLASFYAPDDLLSINCGSSGNSTGSGRTWAGDNDSKFLSKQDESVPATALTQSPSAQQVPYTTARLSRSQISYSFPVSPGQKFLRLFFYPASYPAFDRFDAFFTVKSGGFTLLKDFNASVTADAHREDTIFIEYCVNVGDGERLNLTFTPTSTHPGSYAFVNGIEIVSMPEDLYYTKPDDLGFKLIGSVAGFSISDSVALQTEYRLNVGGRIISATKDTGMLRYWDSDDSFSVKSYFSPADFEGERRPLMFTKVPNYTAPEELYRTERDMRMNKTLNMNTNLTWEFPVDSGFTYMLRLHFCELNPDINISYNRIFDIYIADQSADHGANILNWAKGKGVPVYRDYAVIVSGDAKPASLSLKMHPDLQSQLEYNDAFLNGLEIFKISDSQSNLAGPNPDPLPPPLPNANDLPQKQARKNRRNILIGVIVGVPASIMVLISCTVFFLITRGKNIKSSDGTSKCITNGSLVPAELCHRFSIAEVRAATNNFDELFIIGVGGFGNVYKGNINDGQTPVAVKRLKQGSQQGLHEFRTEIEMLSQLRHNHLVSLVGYCNDGNEMILVYDFMARGTLRDHLYESDQLPLSWHQRLEICLGAARGLHYLHTGAKHAIIHRDIKSTNILIDENWTAKISDFGLSKIGPPGITRSNINISTVVKGSIGYLDPEYYMCQRLTEKSDVYSFGVVLLEVLCGRPPIIRTVERQQQNLVEWVRRCVRENKIYETVDPFIKESIMPESLKEYMGIALQCLDDDGNERPSIGDVMLGLESAMETLNSAKMAELGGALNEDITPSHPK 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4344g00031 849 CDD STKc_IRAK 552 816 - -
Pral4344g00031 849 Pfam Protein tyrosine and serine/threonine kinase 552 816 IPR001245 GO:0004672|GO:0006468
Pral4344g00031 849 Gene3D Phosphorylase Kinase; domain 1 531 622 - -
Pral4344g00031 849 MobiDBLite consensus disorder prediction 449 469 - -
Pral4344g00031 849 FunFam FERONIA receptor-like kinase 256 444 - -
Pral4344g00031 849 SUPERFAMILY Protein kinase-like (PK-like) 528 818 IPR011009 -
Pral4344g00031 849 ProSitePatterns Protein kinases ATP-binding region signature. 552 575 IPR017441 GO:0005524
Pral4344g00031 849 FunFam Receptor-like protein kinase FERONIA 623 839 - -
Pral4344g00031 849 Gene3D - 256 444 - -
Pral4344g00031 849 Gene3D - 68 228 - -
Pral4344g00031 849 Gene3D Transferase(Phosphotransferase) domain 1 623 837 - -
Pral4344g00031 849 SMART serkin_6 546 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4344g00031 849 PANTHER OS03G0124300 PROTEIN-RELATED 46 508 IPR046957 GO:0004672
Pral4344g00031 849 ProSiteProfiles Protein kinase domain profile. 546 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4344g00031 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 667 679 IPR008271 GO:0004672|GO:0006468
Pral4344g00031 849 FunFam FERONIA receptor-like kinase 69 228 - -
Pral4344g00031 849 FunFam Receptor-like protein kinase FERONIA 519 622 - -
Pral4344g00031 849 Pfam Malectin-like domain 72 443 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4344g00031 Pral-Chr4344 986770 989794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4344g00031 57 831 Receptor kinase-like Gene Family AT3G51550 46.335 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4344g00031 Malectin_like 1.1e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4344g00031 - - gsj:114381619 810.061