Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4344g00030 ATGCCTGATTATCTCTATTACACCAAAGCTGATAGCCCTGGATTCAATTTAATTGGTGCGCAGGTCATGTTTTACATTCCCACCAACGTTGCTCTCCAGACAAAGTACCGGCTTAATGTCGGTGGGTGCGAAATCTCAGATACGGATGACACAGGAATGCTCCGATCTTGGGACTTCGATGACAGTTTTCTAGTAAGTCATTGTCAATTACCTGCTGATTTTGAGGGTGAGAGAAGACCCCTGATATTCACTAAAGTTCCTAATTACACAGTACCTGAGCGAGTCTACCGAACAGAACGTAATATGGGGATGAACAAAACTTTGAACAAGAGCACTAACCTTACTTGGGAGTTTCCTGTCGATTCAGGCTTTACCTACATGCTGAGACTCCATTTTTGTGAGCTTACTCCAGGTATCAACGATTCCTACAACAGAATGTTTGATATTTACATAGCCGACCAGTTAGCTGAGGAGGGTGCGAATGTGTTAAAATGGGCAAAGGGAAAAGCAGTTCCGGTATATAAAGACTATGCCGTAATTGTCCCAGGTGATGCAAAACCAGCTAATCTTTCACTCAAAATGCATCCTGTCTCGGGATCGATGACTGAGTACAGTGATGCATTCTTGAACGGACTTGAGATTTTCAAAATCAGTGATCGAAATCTCGCCGGACCCAACTCTTATCTTCCTCCTCCTCCACCACCCAATTCTAATGAGCTACCCCGAGAAAATCAGAGAAGAAGAAGAAGCAAGATAATTGGGGTCGTGGTTTGCACTGCAGCTTTCGTCGCCGTTTTGGTTCTCATTGTTGCTTTCTGCCTCATTACTCGCGGGATGAACGTCAAGTCGAGCGATTATGGAATTTTCAAGCGCTTTCAATTATTTACCACCAAATCAGTGAATATTATTACCAGCGGCTCAATTGTACGGACGGAATTGTGCCATCACTCTCCCATCGTTGAGATCAGAGCCGCCACCAACAACTTCGATGAACTCTTCCTCATCGGAGTCGGAGGATTCGGCAACGTCTACAAAGGTTACATTAACGACGGTCAAACTCCGGTGGCAATCAAACGACTCAAACAAGGGTCGCAACAAGGGCTCCACGAGTTCCGAACTGAGATTGAAATGCTCTCCCAGCTTCGTCACAATCACTTAGTCTCTCTCATTGGCTACTGCAACGATGGCAACGAAATGATCCTCGTCTATGAGTTCATGGCTCGTGGGACCCTCCGTGACCATCTTTACAATTCTAACAACCATCCCCTTTCCTGGAAGCAGAGGTTGAAAATTTGCCAGGGTGCAGCGCAAGGACTACATTATCTTCATACAGGTGCGATACGAAATATCATTCATCGTGACGTGAAGACGACGAACATTTTACTTGACGAAAAATGGGTGGCTAAGTTTTCTGACTTTGGATTATCGAAAATAGGACCCACTGGGATGTCCAAGTCCCACATTTCCACAGTGGTGAAAGGAAGCATTGGTTATTTGGATCCAGAATACTATAAACGCCAAAGGTTGACTCTGAAGTCTGATGTTTATTCGTTTGGTGTGGTTTTACTCGAAGTATTGTGTGGGAGGCCACCTTTCTTACGTACTGTGGAGAAGGAGAAGGCAAGCTTAGTAGAATGGGTCAGCAAATGCCATCGCGAGGGTGTGATTTGTGAAACTGTTGATTCGTTCATAACAGAAAGTATCAGACCAGAGAGCCTTAAAGCGTTCAGCGACATGGCGTTAAAATGTTTGGAAGATGACCCAAATGAACGACCATCGATGAGTGAAGTTGAGTGGGGCCTAGAATTCGCGTTGCAGCTACAAGAAAGTGCAGAGGAAACTGGAGATGAAGGAAAACGCGAGGAAGAAAGGGCTCTGTTAACAGAAGTTACTGATGTGGAAGAAAGACATGAAGTTGGTTTCGATAATGTAGAAATCAGCTTTGCTCTCTGGAATGATGTTAAAAGTCAAGTTTAA 1977 0.4451 MPDYLYYTKADSPGFNLIGAQVMFYIPTNVALQTKYRLNVGGCEISDTDDTGMLRSWDFDDSFLVSHCQLPADFEGERRPLIFTKVPNYTVPERVYRTERNMGMNKTLNKSTNLTWEFPVDSGFTYMLRLHFCELTPGINDSYNRMFDIYIADQLAEEGANVLKWAKGKAVPVYKDYAVIVPGDAKPANLSLKMHPVSGSMTEYSDAFLNGLEIFKISDRNLAGPNSYLPPPPPPNSNELPRENQRRRRSKIIGVVVCTAAFVAVLVLIVAFCLITRGMNVKSSDYGIFKRFQLFTTKSVNIITSGSIVRTELCHHSPIVEIRAATNNFDELFLIGVGGFGNVYKGYINDGQTPVAIKRLKQGSQQGLHEFRTEIEMLSQLRHNHLVSLIGYCNDGNEMILVYEFMARGTLRDHLYNSNNHPLSWKQRLKICQGAAQGLHYLHTGAIRNIIHRDVKTTNILLDEKWVAKFSDFGLSKIGPTGMSKSHISTVVKGSIGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCGRPPFLRTVEKEKASLVEWVSKCHREGVICETVDSFITESIRPESLKAFSDMALKCLEDDPNERPSMSEVEWGLEFALQLQESAEETGDEGKREEERALLTEVTDVEERHEVGFDNVEISFALWNDVKSQV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4344g00030 658 FunFam FERONIA receptor-like kinase 30 218 - -
Pral4344g00030 658 FunFam Receptor-like protein kinase FERONIA 406 623 - -
Pral4344g00030 658 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4344g00030 658 MobiDBLite consensus disorder prediction 226 245 - -
Pral4344g00030 658 Pfam Protein tyrosine and serine/threonine kinase 335 597 IPR001245 GO:0004672|GO:0006468
Pral4344g00030 658 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Pral4344g00030 658 Gene3D - 30 218 - -
Pral4344g00030 658 CDD STKc_IRAK 335 597 - -
Pral4344g00030 658 Gene3D Transferase(Phosphotransferase) domain 1 406 627 - -
Pral4344g00030 658 SUPERFAMILY Protein kinase-like (PK-like) 315 599 IPR011009 -
Pral4344g00030 658 FunFam receptor-like protein kinase FERONIA 293 405 - -
Pral4344g00030 658 Gene3D Phosphorylase Kinase; domain 1 315 405 - -
Pral4344g00030 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Pral4344g00030 658 Pfam Malectin-like domain 29 217 IPR024788 -
Pral4344g00030 658 PANTHER OS07G0166700 PROTEIN 314 608 IPR045272 GO:0004714|GO:0006468
Pral4344g00030 658 SMART serkin_6 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4344g00030 Pral-Chr4344 958308 961032 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4344g00030 1 615 Receptor kinase-like Gene Family AT3G51550 48.576 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4344g00030 PK_Tyr_Ser-Thr 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4344g00030 - - vvi:132255095 684.1