Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4344g00017 ATGGATATCGTCATGGCAATCATTGTGGGAGTGATGTTCGTTCTCTGTTTTTGCTCTGTTTTGCTGAAATGGAATGAAGTGAAGTACAGGAAGAAAGGTTTGCCTCCAGGAACAATGGGTTGGGCAGTCTTCGGAGAAACCATAGAGTTTCTTAAGCATGGTCCAAACTTCATGAAAAATCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGGTGTCCTACTATTGTGTCCATGGATGCAGAGCTTAACAAATATATCCTAATGAATGAATCAAAAGGGCTTGTCCCTGGATACCCTCAATCCATGTTAGATATCTTAGGCAGATGCAATATTGCAGCTGTTCATGGCTCCACTCATAGGTACATGAGAGGAGCACTGCTTTCCCTGATAAGCCCCACCATGATCAGAGATCAGCTATTACCAAAAATTGATGAGTTCATGAGAGCCCACCTCAGAAACTGGAACAACGAAGTCATCAACATTCAAGCCAAAACCAAAGAGATGGCCTTTCTTTCATCTCTGAAGCAAATTGCCGGTATTGAATCAGGCTCAATATCTCAAACATTCATGGCAGAGTTCTTCAAGCTGGTTTTAGGAACCCTCTCACTTCCTATTGACCTTCCTGGCACAAACTATCGTCGTGGTGTTCAGGCAAGGAAGAACATTATCAGCATTCTGAGTCAGCTGCTACAGGAAAGAAGAGCTTCACAGGAAACCCACCTAGACATGCTTGGATGCTTGATGAAAAAGGAAGATAATCGATACATACTAAGCGATGAAGAGATCATTGATCTCATAATAACAATAATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTCAAGTACCTCCATGACCATCCTAATGTTCTTGAAGAACTCAGAAAGGAGCATTTGGCTATAAGAGAAAGGAAAAAGTTAGACGATCCAATTAACTGTAACGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCGAGATTGGCTACAATAGTCAATGGGGTTCTAAGAAAAACTACACAAGACATGGAATTCAATGGCTACTTGATTCCCAAAGGTTGGAGAATATACGTATATACGAGAGAGATCAATTATGATCCATTTCTCTATCCTGAACCACTAACATTCAACCCATGGAGATGGCTGGATAAGAGTCAAGAATCACAAAGTTGCTTTATGATATTTGGAGGAGGCACAAGACAGTGCCCAGGGAAAGAATTGGGGATTGCAGAAATTTGCACTTTCTTACACTACTTTGTAACTAGATACAGATGGGAAGAAGTTGGAGGAGATAAACTAATGAAGTTTCCTAGAGTTGAAGCGCCAAATGGACTGCACATAAGAGTCTCTCATCTTACTAAATAG 1401 0.409 MDIVMAIIVGVMFVLCFCSVLLKWNEVKYRKKGLPPGTMGWAVFGETIEFLKHGPNFMKNQRARYGSFFKSHILGCPTIVSMDAELNKYILMNESKGLVPGYPQSMLDILGRCNIAAVHGSTHRYMRGALLSLISPTMIRDQLLPKIDEFMRAHLRNWNNEVINIQAKTKEMAFLSSLKQIAGIESGSISQTFMAEFFKLVLGTLSLPIDLPGTNYRRGVQARKNIISILSQLLQERRASQETHLDMLGCLMKKEDNRYILSDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPNVLEELRKEHLAIRERKKLDDPINCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTQDMEFNGYLIPKGWRIYVYTREINYDPFLYPEPLTFNPWRWLDKSQESQSCFMIFGGGTRQCPGKELGIAEICTFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSHLTK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4344g00017 466 CDD CYP90-like 61 463 - -
Pral4344g00017 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Pral4344g00017 466 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 Gene3D Cytochrome P450 24 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 FunFam Cytochrome P450 85A1 25 463 - -
Pral4344g00017 466 PANTHER CYTOCHROME P450 26 31 442 - -
Pral4344g00017 466 Pfam Cytochrome P450 35 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4344g00017 466 SUPERFAMILY Cytochrome P450 29 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4344g00017 Pral-Chr4344 711143 714866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4344g00017 82 462 Cytochrome P450 AT5G38970 72.513 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4344g00017 K09590 - gmx:100805958 810.061