Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4344g00010 ATGAGATTGAGAGGCTCAAAGAACGAGTGGAGGAAAGGCCCTTGGACTCATGAAGAAGATAAATTGCTTACTGAATATGTCAACTTGCATGGCGAGGGAAACTGGAGTTCCGTATCAAGATTTTCAGGGCTGAATAGGAGTGGCAAAAGTAGCAGGTTGCGATGGGTGAACTATTTGAAACCTGGACTCAAGAAAGGCCCACTTACACCTCAAGAAGAAGGCATCATTATGGAGCTGCATGCTGTGCTGGGTAACAAGTGGTCTACAATAGCTAGCTACTTGCCTGGTAGAACAGACAATGAGATCAAGAACTATTGGAGAACCCACTTCAAGAAGAAAGATTACAAGTCCTCTCACAATAAGATCGTCGAAAATCGAAGAGCAAAGATGCTAAGTAACCATCAAACAGTTCAAGATAAACAACCTGAAGAATATGATACAAAAAGCATATCGTCTCATGCGGAGGCAAAAAATGAACCAGGCAATACAACCGAGACACCCGAAAACAAAATGCAGGAGATCATGGACTTAATTCAGAACCCAAATTTCGAAGATCAGTTTTACACACCTTCAATGTGCCAAGAGACGTACTTTCCATCATCCATATGGCAAGAAACTGCAGGAGATGATAGCTTGTGGGTTAGTTTATGGGACCAGCTTGATGCATGA 669 0.4245 MRLRGSKNEWRKGPWTHEEDKLLTEYVNLHGEGNWSSVSRFSGLNRSGKSSRLRWVNYLKPGLKKGPLTPQEEGIIMELHAVLGNKWSTIASYLPGRTDNEIKNYWRTHFKKKDYKSSHNKIVENRRAKMLSNHQTVQDKQPEEYDTKSISSHAEAKNEPGNTTETPENKMQEIMDLIQNPNFEDQFYTPSMCQETYFPSSIWQETAGDDSLWVSLWDQLDA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4344g00010 222 MobiDBLite consensus disorder prediction 154 168 - -
Pral4344g00010 222 Gene3D - 67 159 - -
Pral4344g00010 222 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 10 203 - -
Pral4344g00010 222 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
Pral4344g00010 222 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Pral4344g00010 222 CDD SANT 69 110 IPR001005 -
Pral4344g00010 222 Gene3D - 12 64 - -
Pral4344g00010 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 59 IPR017930 -
Pral4344g00010 222 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Pral4344g00010 222 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Pral4344g00010 222 MobiDBLite consensus disorder prediction 132 168 - -
Pral4344g00010 222 SMART sant 11 61 IPR001005 -
Pral4344g00010 222 SMART sant 64 112 IPR001005 -
Pral4344g00010 222 SUPERFAMILY Homeodomain-like 10 106 IPR009057 -
Pral4344g00010 222 CDD SANT 14 59 IPR001005 -
Pral4344g00010 222 FunFam Myb transcription factor 12 64 - -
Pral4344g00010 222 MobiDBLite consensus disorder prediction 139 153 - -
Pral4344g00010 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4344g00010 Pral-Chr4344 536302 537723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4344g00010 11 218 MYB Transcription Factor Family AT3G30210 49.083 1.40e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4344g00010 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4344g00010 K09422 - gmx:100817474 244.588