Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4344g00009 ATGTCATCCAAACAGGCAGACATTTTGCATAAACCGTGGTCTTGCTTGAAACCATGGTTTCCACTGATGAAACCATGGCAACGGACTACTCTGCTCGTGCATTCTCTCCGCTTTGCTGTGCTCGCGATTCTCTCCACTGTGCTCTACTCGCGTCGCGATCACTCTTCTGCTCGCTTCGCTTTGCTCGCAATTTCCGCTATCTTCGCTCTTCGCTCTGCTCGGGCATTCACTCTCAAGAAGCTCACCTTCTCTGCTCGCCGCTTCGCTCTTCAGCCCACTCCTTCTGGTTCACTGGTTCATCGAGCTCGTGCCGTCGCTGGTTCTGTGGTCGTGCTGAGAAGAAGAAGGGATGAAGACGATGGTGATGAAGGGAGGTTCCCCCTCTACCGTCGCGCAGCGTCTCCGTCTTGTGTTTATGCTTCGGTCCCCTGTTTTTCCCAGCCACCGTCCCCCGTGTGTGTGTGTTTCGTTCTCTGCTCGTTCGGCATGTTCTCCCTTAGCCTGCTCCGCCTCGTGTTTAGCTTCTCCGCCAAGATGAAGAAGAAGATTGAATATAGGACAAGTGGAGCCATTGTCGCTTTGGTTGTTTGTGTGTCTTGGCTGTACTTGATATACCAAAAGTGGAATCTGATCAAGCAAAAGGAAAAATTGTTTCAACAAAATGGTGGCTTCATCATGCAACAACGACTCTCTGTTAAAGAAGCTTCCTCCCAAACAGTTAAAATTTTCACCACAGAGGAATTAAAAAGGGCAACCGACAACTACCATTATAGCTCAATTCTTGGAGAAGGAGGATATGGAACTGTTTATAAGGGATCACTGACGGACAAAAAAATTGTCGCAATCAAGAAGTCGAAACTCTTGGATCAAAACCGAATTGAACAGTTCATCAACGAGATCATTGTCCTTTCACAAATAAATCATAAGAACGTGGTGAAACTACTTGGATGCTGTTTAGAAACTGAAATTCCTTTGTTAGTCTATGAGCTTGTCAACAACGGCACCCTTTATGGTCACATTCACGATGAAGAGAAGGCTTCCAAGATGTCTTGCGAAACACATTTGAAGATAGCAGCAGAGACAGCAGAAGCACTATCATATCTGCACTCTGGTGCCTGCATACCCATAATCCATAGAGATGTCAAGACCTCTAACATACTTTTAGATGAAGAATACACAGCCAAAGTGTCTGATTTTGGAGCTTCTAAGTTGGTTCCCCTTGATCAAAGAGAATTAGCCACAATGGTACAAGGAACTCTAGGATACTTGGATCCAGAATACATGCAAACGAGCCAACTCACGGAGAAAAGTGATGTATATAGTTTTGGAGTGGTGCTCGTGGAGCTACTGACAGGGAAGAAAGCTCTTTCATTTGATAAACCAGAAGAGGAAAGATGTCTTGCCAAGTATTTCCTTTCATCCTTGAAGAGAGGTCAATTGTTTGAACTACTTGAAGTTCGCATAATGAACGATGAAAATAATAAGGAGATGCTGAGGGAAGTGGCCTCCCTTGCTGAGAGATGCTTAAGGGTGTGTTTGGCTATTGATCGTGCTGGGGTAGACTGGCTGCTGGTCATGCAAGGGCTGGACTGGTGGCAGGCATATGTCAGGGATCTTGGGAATCAGGATGTTTGGAGCGAAACTGATCACCACATCACGCATAGCCATAACAGCTGCCTTCAACTGGTCAAGCTGTAA 1698 0.4594 MSSKQADILHKPWSCLKPWFPLMKPWQRTTLLVHSLRFAVLAILSTVLYSRRDHSSARFALLAISAIFALRSARAFTLKKLTFSARRFALQPTPSGSLVHRARAVAGSVVVLRRRRDEDDGDEGRFPLYRRAASPSCVYASVPCFSQPPSPVCVCFVLCSFGMFSLSLLRLVFSFSAKMKKKIEYRTSGAIVALVVCVSWLYLIYQKWNLIKQKEKLFQQNGGFIMQQRLSVKEASSQTVKIFTTEELKRATDNYHYSSILGEGGYGTVYKGSLTDKKIVAIKKSKLLDQNRIEQFINEIIVLSQINHKNVVKLLGCCLETEIPLLVYELVNNGTLYGHIHDEEKASKMSCETHLKIAAETAEALSYLHSGACIPIIHRDVKTSNILLDEEYTAKVSDFGASKLVPLDQRELATMVQGTLGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGKKALSFDKPEEERCLAKYFLSSLKRGQLFELLEVRIMNDENNKEMLREVASLAERCLRVCLAIDRAGVDWLLVMQGLDWWQAYVRDLGNQDVWSETDHHITHSHNSCLQLVKL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4344g00009 565 ProSitePatterns Protein kinases ATP-binding region signature. 261 284 IPR017441 GO:0005524
Pral4344g00009 565 SMART serkin_6 255 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4344g00009 565 Gene3D Phosphorylase Kinase; domain 1 225 330 - -
Pral4344g00009 565 Gene3D Transferase(Phosphotransferase) domain 1 331 514 - -
Pral4344g00009 565 FunFam Wall-associated receptor kinase 2 225 330 - -
Pral4344g00009 565 Pfam Protein kinase domain 255 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4344g00009 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Pral4344g00009 565 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 144 511 IPR045274 GO:0007166
Pral4344g00009 565 FunFam Wall-associated receptor kinase 2 331 520 - -
Pral4344g00009 565 SUPERFAMILY Protein kinase-like (PK-like) 234 510 IPR011009 -
Pral4344g00009 565 ProSiteProfiles Protein kinase domain profile. 255 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4344g00009 Pral-Chr4344 511018 528778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4344g00009 189 511 Receptor kinase-like Gene Family AT1G21230 55.828 1.79e-118 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4344g00009 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4344g00009 - - pcin:129296124 501.516