Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4337g00063 ATGGAGGACAGAGTAGTGAACACAATCGCTGTAATATCAGTGATTTTTCTGATCACTTTTGTCGTCATCGCTCGCGTCTTCTTAAACCGTTCAAGAGCCTTCTTCCTCATCTTGGGGGCCGATGTTGCCGTGATCATCGCAATCTTCGCCTTCGTTCTCATCCGAAGGCGATTCAACCGTAGAAGAAGATTGATCGAGTCCCGATTAAAATCTGAAGGTAGCGAGCTCCGAATAGAATACAGCTTCTTACGAAAAGTCGCCGGCGTTCCGACCAAATTTCGATTCCAGGAGCTCGAAGATGCCACCGGTGGATTCCAGTGTCTACTCGGCCAAGGCGCCTCTGCTTCGGTCTTCAAAGGCATTTTAAACGACGGCACGTTGGTCGCGGTGAAGCGAATCAACGGCGAAGAACGAGGCAAGAAGGAGTTCAAATCGGAAGTCGCCGCCATAGCCAGTGTCCAGCACGTCAACCTCGTGCGCCTGATCGGGTATTGTAACTCCGCCGTAGCCCCTAGGTACTTAATTTACGAGTTCATCCCAAATGGCTCTTTAGATTCTTGGATATTTCCCAGTAAAACCGAAAATCGAAGATCGCGCCGTGGGTTTCTATCATGGAGCTTGAGATACAGAATAGCCATTGACGTAGCCAAAGCTCTTTCTTACCTTCACCATGATTGCAGATCAAGAATCCTCCACCTGGATATAAAACCAGAAAACATTCTGCTGGACGAGAATTTCAAAGCAATCGTCGCAGACTTAGGTCTGTCAAAGCTAATGGGGAAAGATGAAAGCCAAGTGATGACCACAGTGAGAGGAACAAGAGGGTATTTAGCTCCAGAATGGCTCTTAGAACATGGAGTTTCAGAGAAAACAGACATATACAGTTACGGTATGGTCCTATTAGAGATCGTAGGAGGAAGAAGAAACGTGTGTTTGATCCAAGATCCGAGGGACAAGGAGAAGAAGAAGTGGGAATACTTTCCCAGGATTGTGAACGAGAAAGTGAGAGAGAACAAGTTAATGGAAATTGTGGATGAGAGATTGATGGAAGGTGGGGGAGTGGAAGAGAGGGAAGTGAAGAGGATGGTGTATGTGGCATTGTGGTGCATCCAAGAGAGGCCAAGGGTGAGGCCAAATATGAAACAAGTGGTGGAGATGCTTGAAGGTAGAGTAATGGTGGATCAGCCGCCTGATACGAGAATGGTTATGGGAAATTTCTTTTCAATGGAAGGAGGAGAAGAAGATGAAGCAGAAAGTTCCCAGACCGTCACAAGTTTGGCTGCTTATTTGGCCAGCCAAAGGGCAACAGGAAATTTGGACTATGTATCCACTTACTCCATGGCCACCACGGTTCTATCTGGTAGATAG 1368 0.47 MEDRVVNTIAVISVIFLITFVVIARVFLNRSRAFFLILGADVAVIIAIFAFVLIRRRFNRRRRLIESRLKSEGSELRIEYSFLRKVAGVPTKFRFQELEDATGGFQCLLGQGASASVFKGILNDGTLVAVKRINGEERGKKEFKSEVAAIASVQHVNLVRLIGYCNSAVAPRYLIYEFIPNGSLDSWIFPSKTENRRSRRGFLSWSLRYRIAIDVAKALSYLHHDCRSRILHLDIKPENILLDENFKAIVADLGLSKLMGKDESQVMTTVRGTRGYLAPEWLLEHGVSEKTDIYSYGMVLLEIVGGRRNVCLIQDPRDKEKKKWEYFPRIVNEKVRENKLMEIVDERLMEGGGVEEREVKRMVYVALWCIQERPRVRPNMKQVVEMLEGRVMVDQPPDTRMVMGNFFSMEGGEEDEAESSQTVTSLAAYLASQRATGNLDYVSTYSMATTVLSGR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4337g00063 455 FunFam Putative receptor-like protein kinase 179 395 - -
Pral4337g00063 455 Pfam Protein kinase domain 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4337g00063 455 ProSiteProfiles Protein kinase domain profile. 103 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4337g00063 455 SUPERFAMILY Protein kinase-like (PK-like) 86 388 IPR011009 -
Pral4337g00063 455 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Pral4337g00063 455 PANTHER OS07G0415500 PROTEIN 42 399 - -
Pral4337g00063 455 FunFam Putative receptor-like protein kinase 70 178 - -
Pral4337g00063 455 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Pral4337g00063 455 Gene3D Transferase(Phosphotransferase) domain 1 179 401 - -
Pral4337g00063 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Pral4337g00063 455 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4337g00063 Pral-Chr4337 598008 599579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4337g00063 1 399 Receptor kinase-like Gene Family AT5G20050 62.344 1.65e-178 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4337g00063 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4337g00063 - - gmx:100779485 602.823