Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4337g00062 ATGGAGGACAGAGTAGTGAACACAATCGCTGTAATATCAGTGATTTTTCTGATCACTTTCAGCTTCTTACGAAAAGTCGCCGGCGTTCCGACCAAATTTCGATTCCAGGAGCTCGAAGATGCCACCGGTGGATTCCAGTGTCTACTCGGCCAAGGCGCCTCTGCTTCGGTCTTCAAAGGCATTTTAAACGACGGCACGTTGGTCGCGGTGAAGCGAATCAACGGCGAAGAACGAGGCAAGAAGGAGTTCAAATCGGAAGTCGCCGCCATAGCCAGTGTCCAGCACGTCAACCTCGTGCGCCTGATCGGGTATTGTAACTCCGCCGTAGCCCCTAGGTACTTAATTTACGAGTTCATCCCAAATGGCTCTTTAGATTCTTGGATATTTCCCAGTAAAACCGAAAATCGAAGATCGCGCCGTGGGTTTCTATCATGGAGCTTGAGATACAGAATAGCCATTGACGTAGCCAAAGCTCTTTCTTACCTTCACCATGATTGCAGATCAAGAATCCTCCACCTGGATATAAAACCAGAAAACATTCTGCTGGACGAGAATTTCAAAGCAATCGTCGCAGACTTAGGTCTGTCAAAGCTAATGGGGAAAGATGAAAGCCAAGTGATGACCACAGTGAGAGGAACAAGAGGGTATTTAGCTCCAGAATGGCTCTTAGAACATGGAGTTTCAGAGAAAACAGACATATACAGTTACGGTATGGTCCTATTAGAGATCGTAGGAGGAAGAAGAAACGTGTGTTTGATCCAAGATCCGAGGGACAAGGAGAAGAAGAAGTGGGAATACTTTCCCAGGATTGTGAACGAGAAAGTGAGAGAGAACAAGTTAATGGAAATTGTGGATGAGAGATTGATGGAAGGTGGGGGAGTGGAAGAGAGGGAAGTGAAGAGGATGGTGTATGTGGCATTGTGGTGCATCCAAGAGAGGCCAAGGGTGAGGCCAAATATGAAACAAGTGGTGGAGATGCTTGAAGGTAGAGTAATGGTGGATCAGCCGCCTGATACGAGAATGGTTATGGGAAATTTCTTTTCAATGGAAGGAGGAGAAGAAGATGAAGCAGAAAGTTCCCAGACCGTCACAAGTTTGGCTGCTTATTTGGCCAGCCAAAGGGCAACAGGAAATTTGGACTATGTATCCACTTACTCCATGGCCACCACGGTTCTATCTGGTAGATAG 1188 0.4672 MEDRVVNTIAVISVIFLITFSFLRKVAGVPTKFRFQELEDATGGFQCLLGQGASASVFKGILNDGTLVAVKRINGEERGKKEFKSEVAAIASVQHVNLVRLIGYCNSAVAPRYLIYEFIPNGSLDSWIFPSKTENRRSRRGFLSWSLRYRIAIDVAKALSYLHHDCRSRILHLDIKPENILLDENFKAIVADLGLSKLMGKDESQVMTTVRGTRGYLAPEWLLEHGVSEKTDIYSYGMVLLEIVGGRRNVCLIQDPRDKEKKKWEYFPRIVNEKVRENKLMEIVDERLMEGGGVEEREVKRMVYVALWCIQERPRVRPNMKQVVEMLEGRVMVDQPPDTRMVMGNFFSMEGGEEDEAESSQTVTSLAAYLASQRATGNLDYVSTYSMATTVLSGR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4337g00062 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Pral4337g00062 395 Gene3D Phosphorylase Kinase; domain 1 19 118 - -
Pral4337g00062 395 FunFam Putative receptor-like protein kinase 14 118 - -
Pral4337g00062 395 SMART serkin_6 43 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4337g00062 395 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Pral4337g00062 395 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 338 - -
Pral4337g00062 395 FunFam Putative receptor-like protein kinase 119 335 - -
Pral4337g00062 395 ProSiteProfiles Protein kinase domain profile. 43 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4337g00062 395 Gene3D Transferase(Phosphotransferase) domain 1 119 341 - -
Pral4337g00062 395 SUPERFAMILY Protein kinase-like (PK-like) 28 328 IPR011009 -
Pral4337g00062 395 Pfam Protein kinase domain 48 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4337g00062 Pral-Chr4337 598008 599579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4337g00062 18 339 Receptor kinase-like Gene Family AT5G20050 65.741 1.92e-149 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4337g00062 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4337g00062 - - gmx:100779485 526.168