Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4337g00040 ATGGCTGAACTTGTGGGTGGACCTCTTCTCTCTGCATTTCTTCAGGTTATTTTTGATCGGATTGCCTCTCCAAACGTTGTGGCCTTCTTACGTGGGAAAAAGTCTACTGAAAAGTCACTCCAAAGGTTGAAGACAACGTTATATGCTGCTGGTGCCGTGCTCCATGACGCTGATCAAAAGCAGATCACTGATTCAGCTGTGAAGAGTTGGCTGGATGATCTCAGAGATGCGATTTATCACGCCGATGACTTGATAGACGAGATTTCCACTCAGGCCGCAACTCTAGTTGAGGTAGAAAAATGCTTTTATTGCTCTTTTGACCTGAATGCTCGAAAGATAAATTTCAAGATCGATGACGTAGTTGACAGACTCGAATCAATTTTGAAGCACAAAGATATTCTTGGTTTGAGAGATCGTGTGGAAAGGGAGAACTTGTCATGGAGGCATCAGTCAACATCCCTCGTTGATGAATTTGATGTGTTTGGCAGAGATAATGAAAGAGATGCCATACTTGAGTTGTTGCTTTCTGATGACATCGATGATAACAAGATATCTGTCTTGCCCATTGTGGGTATGGGTGGGATAGGGAAAACCACACTGGCCCAAGTAGTGTATAATAATGATCAAGTGAAGCAAAAATTTGATCTTAGAGTGTGGGTTTGTGTTTCCGAGGAATTTGATGTCCCTAAGATCACCAATAATATAATAGAGTCTGTCACGTCTCATGCTTGTGATATGCAAGATCTAAATTTACTTCAACTTGATCTGAAGGAGAAGTTATCTGGGAAGAAATTCTTGATTGTTTTAGATGATATTTGGAATGAAAATTACCTTGATTGGGATCTTTTAAGAAGACCTTTTCTATCTGGGACCAAAGGGAGTAAAATCCTCGTAACAACTCGTAGTGAAAAGGTTGCTTCAGTTGTCCGAACTCTTTCATCCTATCATGTAGGCCAATTATCTGATGATGATTGTTGGTTGATATTTGCAAAACATGCATGTCTCTACATGGATTCTGTGGCGGATTCAAATCTAGAAAGCCTTGGTAGGGATATTGTTAACAAATGTAAGGGGCTCCCTTTAGTTTCCAAAACTCTGGGCGGCCTTTTGCGCTTCAAACGTGATATTAGGGATTGGAATATAATATTAAAGAGTGAAATGTGGGACTTGTCAGAGGAGGAGAGCGAAATTCTACCAGCTTTAAGAATCAGTTATCATTATCTCTCTCCACAATTAAAACAATGCTTTGTCTATTGTTCCATGTTTCCAAGAGATTATGAATTTGAGAAAGAGGAATTAATCTTGTTGTGGATGGCTGAAGGTTTCTTAGAGACATCAATGAAAGGAAAGACTTTAGAAGAAGTGGGGGAAGAGTATTTGCATGATTTAGTTTCAAGGTCGTTTTTTCAGCCCTTGGTCATGTATAAGTCTAATAGATTTTTTGTTATGCATGACCTTATCCATGACCTAGCAACATCTGAAGCAAGAAAATTCTACAGCTACAGCTGCAGATCTAGCAAGGGAAATGAAATTACTGACATGGCGCGCCATGTGTTTTGTGGAGACGGAGACTTTAGCTCTATAAGCAAAGCAAAATCTTTGCGGACAATTCTTGTCAGGAAAGAGTGTGGTGGGTTTTTGCCATCAAACAGATTTTCAAAGCTTAAGTGCTTGCGTGTATTATCACTCTACAATGTCTTGTCTGGGGCATTGCCAGATTCAATAGACAAATTGATCCATTTGCGCTATTTAAATCTCTCTCGAACTAGTATCAAAAAGTTGCCGGACAATTTATGCCTCTTGTACAATCTACAAATGCTGATAGTGAGAGATTGTGATGGTCTAACCAAGCTGCCCAATGACATGAAGAAGCTTGTGAGCTTGCGATATCTTGATGCTTCTCATTCTCGATTACAAGCGATGCCGAAAGGAATTGGTGAATTGAAAAAATTGCACTTTCTGAGTGACTTTGTATTGAACAGAGTTGAAGGGGCTAGTATTAGAGAATTGGGTGGACTTCAAAATCTCAGCTCATCTTTAACAATAAAGAACTTGCAGCATGTATCCAATGGCGGGGAAGCCTCAGAGACAAGATTGGCAGATAAGCGGTCAATTGAAACTTTATCTCTGACATGGAATGATGCTGGTGATATTGTCAACTCAAGAGACATACTTGACAATCTACAGCCTCATGTGAACCTGAAATTTCTCGATATTTATGGATATAATGCAACTGCTTTCTCAAATTGGTTAGGATGCCCATTGTACTGCAAAATGGTTCAACTGATCCTTTATGATTGCTTCAATTGCAGCCTACTGCCGCCACTTGGGCAACTACCTTCTCTTCGGATGCTACAGATTGAAGGATTTGATGCATTGATGAAGATCAGTACTGAGTTCTACAAGAGAAATGATGATACTTTTTTGGCAACGCCCTTTCCATCCCTTGAAATTCTGGAATTTAGAAAGATGCCTGTCTTGCAGGAATGGGGGAGCTTATGTCCCATAAATGCTTTTCCTAAACTAAAACATCTCACATTAAAGGATTGTCCTAGATTAAGTGATCATTTGCCTAGTTACCTTCCTGATTTGGTAACACTCCGCATTGATGGATGTGATCACTTGGCAGCTTCTATCCCAAGGGCTCGATCAATATATATCAGTGGTTGTAAAGATATGGATTTTTGGGGGCATCATCATTTTGAACTTGCGGAGTCCATCATTATAACTAATAGCTGTGAGACACTTTCTTGCTTGTCATTAAATAACATTCCTAATCTCCAACAACTCATAATGACCGGCTGTAAGAATCTCAAATCTGTTGCATTTACAAGGGTTGCTTGTTTGCATCTTAAGCAAATTAAGCTGATTGATTGCCCCAGTCTTGAATCTTTCTCACTGCAGAGTTTGTTTGCACCCAACATGACTCATTTGGAGTTAGAAAGATGCTGTAACTTTAAGTCATTGCTTGATCTCAGGATGAATCTTCTAATGTTACAACATATATCATTAAGCGGTTGTCCAGGCATTGAGTGGGTTCCTGGGAGGAGTCTGCCACCTAATTTGATGTCTCTTTATATTGATCATTGGGCGTTTTCATGCCTGTGTGGTTCTATGGAGTGGCAGTCTTTACGCAGTCTCACTACTCTCTCAGTAACTGGTAAATATGATGATGGTGTACAATCGTTCCCAGAGGAGTGCTTGTTGCCTTCCTCTCTTGCCATTTTGTCCATTAGCAACTATCCAAGTCTGGAAACATTGAACTGCAGGGGATTTGTTAATCTAAAGTCTCTTCAAGAATTAAGGATCAGACAATGCCCCAAGCTACAAAGAATAATAGGACAAATGCTGCCTGCCTCTCTCACACATCTCAATATCTATCGGTGTTCTTTACTTGGAGAATTGTGCCATGCAAAGAATGGGGAAATTTGGCCCAAAATTTCCCACATTCCAAATATTTCCATTGACAATAATCGGGTTTTGTGA 3486 0.3993 MAELVGGPLLSAFLQVIFDRIASPNVVAFLRGKKSTEKSLQRLKTTLYAAGAVLHDADQKQITDSAVKSWLDDLRDAIYHADDLIDEISTQAATLVEVEKCFYCSFDLNARKINFKIDDVVDRLESILKHKDILGLRDRVERENLSWRHQSTSLVDEFDVFGRDNERDAILELLLSDDIDDNKISVLPIVGMGGIGKTTLAQVVYNNDQVKQKFDLRVWVCVSEEFDVPKITNNIIESVTSHACDMQDLNLLQLDLKEKLSGKKFLIVLDDIWNENYLDWDLLRRPFLSGTKGSKILVTTRSEKVASVVRTLSSYHVGQLSDDDCWLIFAKHACLYMDSVADSNLESLGRDIVNKCKGLPLVSKTLGGLLRFKRDIRDWNIILKSEMWDLSEEESEILPALRISYHYLSPQLKQCFVYCSMFPRDYEFEKEELILLWMAEGFLETSMKGKTLEEVGEEYLHDLVSRSFFQPLVMYKSNRFFVMHDLIHDLATSEARKFYSYSCRSSKGNEITDMARHVFCGDGDFSSISKAKSLRTILVRKECGGFLPSNRFSKLKCLRVLSLYNVLSGALPDSIDKLIHLRYLNLSRTSIKKLPDNLCLLYNLQMLIVRDCDGLTKLPNDMKKLVSLRYLDASHSRLQAMPKGIGELKKLHFLSDFVLNRVEGASIRELGGLQNLSSSLTIKNLQHVSNGGEASETRLADKRSIETLSLTWNDAGDIVNSRDILDNLQPHVNLKFLDIYGYNATAFSNWLGCPLYCKMVQLILYDCFNCSLLPPLGQLPSLRMLQIEGFDALMKISTEFYKRNDDTFLATPFPSLEILEFRKMPVLQEWGSLCPINAFPKLKHLTLKDCPRLSDHLPSYLPDLVTLRIDGCDHLAASIPRARSIYISGCKDMDFWGHHHFELAESIIITNSCETLSCLSLNNIPNLQQLIMTGCKNLKSVAFTRVACLHLKQIKLIDCPSLESFSLQSLFAPNMTHLELERCCNFKSLLDLRMNLLMLQHISLSGCPGIEWVPGRSLPPNLMSLYIDHWAFSCLCGSMEWQSLRSLTTLSVTGKYDDGVQSFPEECLLPSSLAILSISNYPSLETLNCRGFVNLKSLQELRIRQCPKLQRIIGQMLPASLTHLNIYRCSLLGELCHAKNGEIWPKISHIPNISIDNNRVL 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4337g00040 1161 SMART LRR_typ_2 625 648 IPR003591 -
Pral4337g00040 1161 SMART LRR_typ_2 578 601 IPR003591 -
Pral4337g00040 1161 Gene3D - 27 114 - -
Pral4337g00040 1161 Gene3D Ribonuclease Inhibitor 899 1024 IPR032675 -
Pral4337g00040 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 419 IPR027417 -
Pral4337g00040 1161 FunFam Probable disease resistance protein At1g63360 405 493 - -
Pral4337g00040 1161 Gene3D - 319 409 IPR042197 -
Pral4337g00040 1161 Gene3D Ribonuclease Inhibitor 525 895 IPR032675 -
Pral4337g00040 1161 Pfam NB-ARC domain 168 385 IPR002182 GO:0043531
Pral4337g00040 1161 PANTHER DISEASE RESISTANCE PROTEIN RP 44 953 IPR044974 GO:0006952
Pral4337g00040 1161 SUPERFAMILY L domain-like 911 1146 - -
Pral4337g00040 1161 Gene3D - 139 314 IPR027417 -
Pral4337g00040 1161 FunFam Probable disease resistance protein At1g61300 146 312 - -
Pral4337g00040 1161 Pfam Rx N-terminal domain 10 94 IPR041118 -
Pral4337g00040 1161 SUPERFAMILY L domain-like 482 887 - -
Pral4337g00040 1161 Gene3D Ribonuclease Inhibitor 1025 1160 IPR032675 -
Pral4337g00040 1161 PRINTS Disease resistance protein signature 356 370 - -
Pral4337g00040 1161 PRINTS Disease resistance protein signature 259 273 - -
Pral4337g00040 1161 PRINTS Disease resistance protein signature 922 938 - -
Pral4337g00040 1161 PRINTS Disease resistance protein signature 186 201 - -
Pral4337g00040 1161 Gene3D - 410 493 IPR036388 -
Pral4337g00040 1161 ProSiteProfiles Leucine-rich repeat profile. 580 601 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4337g00040 Pral-Chr4337 403999 407731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4337g00040 184 507 WRKY Transcription Factor Family AT5G45050 25.075 2.08e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4337g00040 - - gmx:100786643 957.207