Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4337g00032 ATGGGTGGGATAGGGAAAACCACATTGGCCCAAGTAGTGTATAATAATGATCAAGTGAAGCAAAAATTTGATCTTAGAGTGTGGGTTTGTGTTTCCGAAGAATTTGATGTCCCTAAGATCACCAATAATATAATAGAGTCTGTCACGTCTCATGCTTGTGATATGAAAGATCTAAATTTACTTCAACTTGATCTGAAGGAGAAGTTATCTGGGAAGAAATTCTTGATTGTTTTAGATGATATTTGGAATGAAAATTACCTTGATTGGGATCTTTTAAGAAGACCTTTTCTATCTGGGACCAAAGGGAGTAAAATCCTCGTAACAACTCGTAGTGAAAAGGTTGCTTCAGTTGTCCGAACTCTTTCATCCTATCATGTAGGTCAATTATCTGATGATGATTGTTGGTTGATATTTGCAAAACATGCATGTCTCTACATGGATTCTGTGGCGGATTCAAATCTAGAAAGCCTTGGTAGGGATATTGTTAACAAATGTAAGGGGCTCCCTTTAGTTTCCAAAACTCTGGGCGGCCTTTTGCGCTTCAAACGTGATATTAGGGATTGGAATATAATATTAAAGAGTGAAATGTGGGACTTGTCAGAGGAGGAGAGTGAAATTCTACCAGCTTTAAGAATCAGTTATCATTATCTCTCTCCACAATTAAAACAATGCTTTGTCTATTGTTCCATGTTTCCTAGAGATTATGAATTTGAGAAAGAGGAATTAATCTTGTGGTGGATGGCTGAAGGTTTCTTAGAGACATCAATGAAAGGGAAGACTTTAGAAGAAGTGGGGGAAGAGTATTTGCATGATTTAGTTTCAAGGTCGTTTTTTCAGCCCTTGGTCATGTATAAGTCTAATAGATTTTTTGTTATGCATGACCTTATCCATGACCTAGCAACATCTGAAGCAAGAAAATTCTACAGCTACAGCTGCAGATCTAGCAAGGGAAATGAAATTACTGACATGACGCGCCATGTGTTTTGTGGAGACGGAGACTTTAGCTCTATAAGCAAAGCAAAATCTTTGCGGACAATTCTTGTCAGGAAAGAGTGTGGTGGGTTTTTGCCATCAAACAGATTTTCAAAGCTTAAGTGCTTGCGTGTATTATCACTCTACAATGTCGTGTCTGGGGCATTGCCAGATTCAATAAACAAATTGATCCATTTGCGCTATTTAAATCTCTCTCGAACTAGTATCAAAAAGTTGCCGGACAATTTATGCCTCTTGTACAATCTACAAATGCTGATAGTGAGAGATTGTGATGGTCTAACCAAGCTGCCCAATGACATGAAGAAGCTTGTGAGCTTGCGATATCTTGATGCTTCTCATTCTCGATTACAAGCGATGCCAAGAGGAATTGGTGAATTGAAAAAATTGCACTTTCTGAGTGACTTTGTATTGAACAGAGTTGAAGGGGCTAGTATTAGAGAATTGGGTGAACTTCAAAATCTCAGCTCATCTTTAACAATAAAGAACTTGCAGCATGTATCCAATGGCGGGGAAGCCTTAGAGACAAGATTGGCAGATAAGTTGTCAATTGAAACTTTATCTCTGACATGGAATGATGCTGGTGATATTGTCAACTCAAGAGACATACTTGACAATCTACAGCCTCATGTGAACCTGAAATGTCTCCATATTTATGGATATAATGCAACTGCTTTCTCAAATTGGTTAGGATGCCCATTGTACTGCAAAATGGTTCAACTGGTCCTTTATGATTGCTTCAATTGCAGCCTACTGCCGCCACTTGGGCAACTACCTTCTCTTCGGACGCTACAGATTGAAGGATTTGATGCATTGGTGAAGATCAGTCCTGAGTTCTACAAGAGAAATGATGATACTTTTTTGGCAACACCCTTTACATCCCTCGAATTCTGGAATTTAGAAAGATGCCTGTCTTGCAGGAATGGGGGAGCTTATGTCCCATAA 1935 0.3891 MGGIGKTTLAQVVYNNDQVKQKFDLRVWVCVSEEFDVPKITNNIIESVTSHACDMKDLNLLQLDLKEKLSGKKFLIVLDDIWNENYLDWDLLRRPFLSGTKGSKILVTTRSEKVASVVRTLSSYHVGQLSDDDCWLIFAKHACLYMDSVADSNLESLGRDIVNKCKGLPLVSKTLGGLLRFKRDIRDWNIILKSEMWDLSEEESEILPALRISYHYLSPQLKQCFVYCSMFPRDYEFEKEELILWWMAEGFLETSMKGKTLEEVGEEYLHDLVSRSFFQPLVMYKSNRFFVMHDLIHDLATSEARKFYSYSCRSSKGNEITDMTRHVFCGDGDFSSISKAKSLRTILVRKECGGFLPSNRFSKLKCLRVLSLYNVVSGALPDSINKLIHLRYLNLSRTSIKKLPDNLCLLYNLQMLIVRDCDGLTKLPNDMKKLVSLRYLDASHSRLQAMPRGIGELKKLHFLSDFVLNRVEGASIRELGELQNLSSSLTIKNLQHVSNGGEALETRLADKLSIETLSLTWNDAGDIVNSRDILDNLQPHVNLKCLHIYGYNATAFSNWLGCPLYCKMVQLVLYDCFNCSLLPPLGQLPSLRTLQIEGFDALVKISPEFYKRNDDTFLATPFTSLEFWNLERCLSCRNGGAYVP 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4337g00032 644 Gene3D - 1 123 IPR027417 -
Pral4337g00032 644 PRINTS Disease resistance protein signature 586 602 - -
Pral4337g00032 644 PRINTS Disease resistance protein signature 68 82 - -
Pral4337g00032 644 PRINTS Disease resistance protein signature 165 179 - -
Pral4337g00032 644 SMART LRR_typ_2 434 457 IPR003591 -
Pral4337g00032 644 SMART LRR_typ_2 387 410 IPR003591 -
Pral4337g00032 644 ProSiteProfiles Leucine-rich repeat profile. 389 410 IPR001611 GO:0005515
Pral4337g00032 644 PANTHER DISEASE RESISTANCE PROTEIN RP 1 630 IPR044974 GO:0006952
Pral4337g00032 644 SUPERFAMILY L domain-like 291 607 - -
Pral4337g00032 644 FunFam Probable disease resistance protein At1g63360 214 302 - -
Pral4337g00032 644 Gene3D - 219 302 IPR036388 -
Pral4337g00032 644 Pfam NB-ARC domain 1 213 IPR002182 GO:0043531
Pral4337g00032 644 Gene3D Ribonuclease Inhibitor 334 638 IPR032675 -
Pral4337g00032 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 228 IPR027417 -
Pral4337g00032 644 Gene3D - 128 218 IPR042197 -
Pral4337g00032 644 FunFam Probable disease resistance protein At1g61300 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4337g00032 Pral-Chr4337 241716 243822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4337g00032 1 316 WRKY Transcription Factor Family AT5G45050 24.465 7.99e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4337g00032 - - qsa:O6P43_032079 635.95