Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4337g00024 ATGCCTCGTAAGGTGAATTATGGACTTGACTATGATGATGATTACGATGACTATGAAGAGTATGATTATGATGTTGAAATAGAAGAATATGGAGAAGAACCTGAACCTGATAAAAAGCAAGAGACTAAAGGGCTTTGGAGGTGCTCTATTTGCACTTACGACAACGAAGAGAGCATGATTGTATGTGATATTTGTGGTGTTGTGCGTCATCCTTATGTTAACACGGGAGCTTCTGACAATAGCAAAACAGCTCCTTTCAAGTTTGGTGTTCCATCCCCAGATGATGTGGTTTCTACTGGATTGTGGTCTTCCAAAATGGGGTTGAAAGGCACGGTTGCTGACACTAGGAGTTCTTACGTTTCATCAAGTATAATGCAGAACAATGAATTGAAAGTACAGTCAAATGGTGAAAGTTCAGCCAGCTCATCATCTTCGGTTCAGAAGGGCAAGGGGGATAGTTTCAAGCTCTCTAATGATGTAGCATTTGATCAAAAAATAAGTCATAAAACTTCAGGCAGCTTACCAGCATCTTCTGCCATGGGTGAAAGTAAAATGAGTAAAATCAAGTCTACCCATGATGGCAAAATTGATATTCAATCTAGTGAAGAATTGTCAGATAGTTTGTCTGCACTGATGAAAGTCAGAGACAGTCATGGTGAAATTTATTCTTCTTCTAGCAAAGATGTCAGACCTCAAAGGAGTTCTGACAACATGGCTGTTGATGTAAGAACTAAAAAATCAGATAATACTATTTCTAAAGCACCACATCCACAAGTGCCTTATAAACCAGAAAAATGGATGCTCCCTCAGCAAGCTGAAGATACCTTGACACAGCTGAATCTTGCAGTTGTTGGTCATGTTGATTCTGGGAAGTCAACACTGTCAGGCAGACTACTACATTTGTTGGGACGAATTACACAAAAAGAAATGCACAAATACGAAAAGGAGGCCAAGTTACAGGGTAAGGGATCCTTTGCTTTTGCTTGGGCACTGGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACGATGACAGTAGCTGTTGCATATTTTGACACCAACAAATATCATGTTGTTGTGCTCGACTCCCCGGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATTGATGCATCAGTTGGTGCATATGAAGCAGGTATGGATAGTGGCAAAGGACAAACAAGGGAGCATGCACAACTTATTAGAAGTTTTGGTGTTGATCAAGTTATTGTGGCAATAAATAAGATGGATGTTGTGGGATACTCTAAAGATCGGTTTGATTTTATTAGACAGCAATTGGGAGTGTTTCTCCGTACATGTGGTTTTAAAAATTCTTGTGTGTCATGGATTCCCTTGAGTGTTGTAGAAAATCAAAATCTGGTGGCATCTCCTTCTGATGTTCGTTTTAAATCTTGGTATAAAGGACCCTATTTGTTAGATGCAATTGATTCACTTCAACCTCCAATTAGAGAATTCTCAAAGCCGCTGCTAATGCCAATATGTGATGTTATCAAGTCCCCTACACTTGGTCAGGTCTCCGCATGTGGTAAATTGGAAGCTGGAGCTCTTCGGATTGGATCAAAGGTCTTAGTCATGCCTTCAGCTGTTTTGGGGACAGTTCGCACATTGGAGCGTGATTCTAATGCTTGCACTATTGCAAGAGCTGGAGATAATGTAGCTGTCGCGTTGAATGGTGTAGACGCAAGTCATGTGATGCCAGGAGCAGTATTATGCCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTAGAGGGTGCAAATCCCATATTGGTAGGATCGCAGATAGAGTTTCATGTACACCACGCCAAGGAGCCTGCGAGAGTTTCAAAAATATTGTCAATACTTGATCCTAAGACTGGGGAGGTGACAAAAAAGTCCCCCCGCTGTCTCATTGCAAAGCAGAGTGCAGTAGTTGAGGTAATTTTGCAAGAGCCAGTATGTGTGGTAGAATCCTCTAGCTGCAAAGCTCTTGGAAGGGTGTCTCTAAGAGCATCAGGAAGGACAATTGCTGTTGGACTTGTGACCCGAATAATCGGAGAGCAAGAGTGA 2124 0.4143 MPRKVNYGLDYDDDYDDYEEYDYDVEIEEYGEEPEPDKKQETKGLWRCSICTYDNEESMIVCDICGVVRHPYVNTGASDNSKTAPFKFGVPSPDDVVSTGLWSSKMGLKGTVADTRSSYVSSSIMQNNELKVQSNGESSASSSSSVQKGKGDSFKLSNDVAFDQKISHKTSGSLPASSAMGESKMSKIKSTHDGKIDIQSSEELSDSLSALMKVRDSHGEIYSSSSKDVRPQRSSDNMAVDVRTKKSDNTISKAPHPQVPYKPEKWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLLGRITQKEMHKYEKEAKLQGKGSFAFAWALDESSEERERGITMTVAVAYFDTNKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSGKGQTREHAQLIRSFGVDQVIVAINKMDVVGYSKDRFDFIRQQLGVFLRTCGFKNSCVSWIPLSVVENQNLVASPSDVRFKSWYKGPYLLDAIDSLQPPIREFSKPLLMPICDVIKSPTLGQVSACGKLEAGALRIGSKVLVMPSAVLGTVRTLERDSNACTIARAGDNVAVALNGVDASHVMPGAVLCHPDFPVKVASHLELKVLVLEGANPILVGSQIEFHVHHAKEPARVSKILSILDPKTGEVTKKSPRCLIAKQSAVVEVILQEPVCVVESSSCKALGRVSLRASGRTIAVGLVTRIIGEQE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4337g00024 707 Pfam Elongation factor Tu C-terminal domain 594 702 IPR004160 -
Pral4337g00024 707 MobiDBLite consensus disorder prediction 130 152 - -
Pral4337g00024 707 Gene3D Translation factors 597 706 - -
Pral4337g00024 707 ProSiteProfiles Zinc finger RanBP2 type profile. 42 71 IPR001876 -
Pral4337g00024 707 SUPERFAMILY Ran binding protein zinc finger-like 42 69 IPR036443 -
Pral4337g00024 707 Gene3D - 267 500 IPR027417 -
Pral4337g00024 707 MobiDBLite consensus disorder prediction 219 262 - -
Pral4337g00024 707 FunFam Elongation factor 1 alpha-like protein 269 500 - -
Pral4337g00024 707 Gene3D Translation factors 504 593 - -
Pral4337g00024 707 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 600 703 IPR009001 -
Pral4337g00024 707 PRINTS GTP-binding elongation factor signature 359 369 IPR000795 GO:0003924|GO:0005525
Pral4337g00024 707 PRINTS GTP-binding elongation factor signature 339 347 IPR000795 GO:0003924|GO:0005525
Pral4337g00024 707 PRINTS GTP-binding elongation factor signature 375 386 IPR000795 GO:0003924|GO:0005525
Pral4337g00024 707 PRINTS GTP-binding elongation factor signature 420 429 IPR000795 GO:0003924|GO:0005525
Pral4337g00024 707 PRINTS GTP-binding elongation factor signature 280 293 IPR000795 GO:0003924|GO:0005525
Pral4337g00024 707 MobiDBLite consensus disorder prediction 167 198 - -
Pral4337g00024 707 FunFam Translation elongation factor EF-1 503 593 - -
Pral4337g00024 707 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 276 507 IPR000795 GO:0003924|GO:0005525
Pral4337g00024 707 PANTHER TRANSLATION FACTOR 275 702 - -
Pral4337g00024 707 SMART zf_4 44 68 IPR001876 -
Pral4337g00024 707 FunFam elongation factor 1-alpha isoform X4 597 706 - -
Pral4337g00024 707 Pfam Elongation factor Tu GTP binding domain 279 495 IPR000795 GO:0003924|GO:0005525
Pral4337g00024 707 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Pral4337g00024 707 MobiDBLite consensus disorder prediction 167 185 - -
Pral4337g00024 707 SUPERFAMILY Translation proteins 498 593 IPR009000 -
Pral4337g00024 707 CDD PHD_SF 47 72 - -
Pral4337g00024 707 CDD HBS1_C_III 594 702 - -
Pral4337g00024 707 CDD EF1_alpha 280 499 - -
Pral4337g00024 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 278 521 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4337g00024 Pral-Chr4337 143291 152105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4337g00024 41 703 Eukaryotic Initiation Factors Gene Family AT5G10630 62.048 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4337g00024 K14416 - gmx:100798594 983.4