Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4337g00023 ATGCCTCGTAAGGTGAATTATGGACTTGACTATGATGATGATTACGATGACTATGAAGAGTATGATTATGATGTTGAAATAGAAGAATATGGAGAAGAACCTGAACCTGATAAAAAGCAAGAGACTAAAGGGCTTTGGAGGTGCTCTATTTGCACTTACGACAACGAAGAGAGCATGATTGTATGTGATATTTGTGGTGTTGTGCGTCATCCTTATGTTAACACGGGAGCTTCTGACAATAGCAAAACAGGCACGGTTGCTGACACTAGGAGTTCTTACGTTTCATCAAGTATAATGCAGAACAATGAATTGAAAGTACAGTCAAATGGTGAAAGTTCAGCCAGCTCATCATCTTCGGTTCAGAAGGGCAAGGGGGATAGTTTCAAGCTCTCTAATGATGTAGCATTTGATCAAAAAATAAGTCATAAAACTTCAGGCAGCTTACCAGCATCTTCTGCCATGGGTGAAAGTAAAATGAGTAAAATCAAGTCTACCCATGATGGCAAAATTGATATTCAATCTAGTGAAGAATTGTCAGATAGTTTGTCTGCACTGATGAAAGTCAGAGACAGTCATGGTGAAATTTATTCTTCTTCTAGCAAAGATGTCAGACCTCAAAGGAGTTCTGACAACATGGCTGTTGATGTAAGAACTAAAAAATCAGATAATACTATTTCTAAAGCACCACATCCACAAGTGCCTTATAAACCAGAAAAATGGATGCTCCCTCAGCAAGCTGAAGATACCTTGACACAGCTGAATCTTGCAGTTGTTGGTCATGTTGATTCTGGGAAGTCAACACTGTCAGGCAGACTACTACATTTGTTGGGACGAATTACACAAAAAGAAATGCACAAATACGAAAAGGAGGCCAAGTTACAGGGTAAGGGATCCTTTGCTTTTGCTTGGGCACTGGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACGATGACAGTAGCTGTTGCATATTTTGACACCAACAAATATCATGTTGTTGTGCTCGACTCCCCGGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATTGATGCATCAGTTGGTGCATATGAAGCAGGTATGGATAGTGGCAAAGGACAAACAAGGGAGCATGCACAACTTATTAGAAGTTTTGGTGTTGATCAAGTTATTGTGGCAATAAATAAGATGGATGTTGTGGGATACTCTAAAGATCGGTTTGATTTTATTAGACAGCAATTGGGAGTGTTTCTCCGTACATGTGGTTTTAAAAATTCTTGTGTGTCATGGATTCCCTTGAGTGTTGTAGAAAATCAAAATCTGGTGGCATCTCCTTCTGATGTTCGTTTTAAATCTTGGTATAAAGGACCCTATTTGTTAGATGCAATTGATTCACTTCAACCTCCAATTAGAGAATTCTCAAAGCCGCTGCTAATGCCAATATGTGATGTTATCAAGTCCCCTACACTTGGTCAGGTCTCCGCATGTGGTAAATTGGAAGCTGGAGCTCTTCGGATTGGATCAAAGGTCTTAGTCATGCCTTCAGCTGTTTTGGGGACAGTTCGCACATTGGAGCGTGATTCTAATGCTTGCACTATTGCAAGAGCTGGAGATAATGTAGCTGTCGCGTTGAATGGTGTAGACGCAAGTCATGTGATGCCAGGAGCAGTATTATGCCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTAGAGGGTGCAAATCCCATATTGGTAGGATCGCAGATAGAGTTTCATGTACACCACGCCAAGGAGCCTGCGAGAGTTTCAAAAATATTGTCAATACTTGATCCTAAGACTGGGGAGGTGACAAAAAAGTCCCCCCGCTGTCTCATTGCAAAGCAGAGTGCAGTAGTTGAGGTAATTTTGCAAGAGCCAGTATGTGTGGTAGAATCCTCTAGCTGCAAAGCTCTTGGAAGGGTGTCTCTAAGAGCATCAGGAAGGACAATTGCTGTTGGACTTGTGACCCGAATAATCGGAGAGCAAGAGTGA 2046 0.413 MPRKVNYGLDYDDDYDDYEEYDYDVEIEEYGEEPEPDKKQETKGLWRCSICTYDNEESMIVCDICGVVRHPYVNTGASDNSKTGTVADTRSSYVSSSIMQNNELKVQSNGESSASSSSSVQKGKGDSFKLSNDVAFDQKISHKTSGSLPASSAMGESKMSKIKSTHDGKIDIQSSEELSDSLSALMKVRDSHGEIYSSSSKDVRPQRSSDNMAVDVRTKKSDNTISKAPHPQVPYKPEKWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLLGRITQKEMHKYEKEAKLQGKGSFAFAWALDESSEERERGITMTVAVAYFDTNKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSGKGQTREHAQLIRSFGVDQVIVAINKMDVVGYSKDRFDFIRQQLGVFLRTCGFKNSCVSWIPLSVVENQNLVASPSDVRFKSWYKGPYLLDAIDSLQPPIREFSKPLLMPICDVIKSPTLGQVSACGKLEAGALRIGSKVLVMPSAVLGTVRTLERDSNACTIARAGDNVAVALNGVDASHVMPGAVLCHPDFPVKVASHLELKVLVLEGANPILVGSQIEFHVHHAKEPARVSKILSILDPKTGEVTKKSPRCLIAKQSAVVEVILQEPVCVVESSSCKALGRVSLRASGRTIAVGLVTRIIGEQE 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4337g00023 681 Gene3D Translation factors 478 567 - -
Pral4337g00023 681 MobiDBLite consensus disorder prediction 193 236 - -
Pral4337g00023 681 CDD EF1_alpha 254 473 - -
Pral4337g00023 681 MobiDBLite consensus disorder prediction 141 172 - -
Pral4337g00023 681 FunFam elongation factor 1-alpha isoform X4 571 680 - -
Pral4337g00023 681 ProSiteProfiles Zinc finger RanBP2 type profile. 42 71 IPR001876 -
Pral4337g00023 681 CDD HBS1_C_III 568 676 - -
Pral4337g00023 681 PANTHER TRANSLATION FACTOR 249 676 - -
Pral4337g00023 681 PRINTS GTP-binding elongation factor signature 349 360 IPR000795 GO:0003924|GO:0005525
Pral4337g00023 681 PRINTS GTP-binding elongation factor signature 254 267 IPR000795 GO:0003924|GO:0005525
Pral4337g00023 681 PRINTS GTP-binding elongation factor signature 313 321 IPR000795 GO:0003924|GO:0005525
Pral4337g00023 681 PRINTS GTP-binding elongation factor signature 394 403 IPR000795 GO:0003924|GO:0005525
Pral4337g00023 681 PRINTS GTP-binding elongation factor signature 333 343 IPR000795 GO:0003924|GO:0005525
Pral4337g00023 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 495 IPR027417 -
Pral4337g00023 681 MobiDBLite consensus disorder prediction 98 127 - -
Pral4337g00023 681 FunFam Translation elongation factor EF-1 477 567 - -
Pral4337g00023 681 SMART zf_4 44 68 IPR001876 -
Pral4337g00023 681 MobiDBLite consensus disorder prediction 141 159 - -
Pral4337g00023 681 Gene3D - 241 474 IPR027417 -
Pral4337g00023 681 FunFam Elongation factor 1 alpha-like protein 243 474 - -
Pral4337g00023 681 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 250 481 IPR000795 GO:0003924|GO:0005525
Pral4337g00023 681 SUPERFAMILY Ran binding protein zinc finger-like 42 69 IPR036443 -
Pral4337g00023 681 Pfam Elongation factor Tu GTP binding domain 253 469 IPR000795 GO:0003924|GO:0005525
Pral4337g00023 681 Gene3D Translation factors 571 680 - -
Pral4337g00023 681 Pfam Elongation factor Tu C-terminal domain 568 676 IPR004160 -
Pral4337g00023 681 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Pral4337g00023 681 MobiDBLite consensus disorder prediction 98 126 - -
Pral4337g00023 681 CDD PHD_SF 47 72 - -
Pral4337g00023 681 SUPERFAMILY Translation proteins 472 567 IPR009000 -
Pral4337g00023 681 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 574 677 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4337g00023 Pral-Chr4337 143290 152105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4337g00023 41 677 Eukaryotic Initiation Factors Gene Family AT5G10630 60.998 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4337g00023 K14416 - gmx:100798594 934.865