Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4336g00033 ATGGGTTTTCGTTTACCAGGAATTAGGAGGACTTCCTTCGCTGCCAAAGTGAGCTCTGCAAAATGTGCTGAAGTGCCAAAGGGACATCTCGCATTATATGTTGGAGAGGAAATGAAGAGATTTGTTATCCCTATATCATACTTGAATCAGCCTTCTTTCCAAGAATTGTTAAGTGAAGCTGAAGAAGAATTTGGGTTTGATCATCCAATGGGTGCCCTCACCATTCCTTGCACAGAAGATGTCTTCCTAAAAGTCACTACTTGCTTCAACGGGTGCTAG 279 0.4265 MGFRLPGIRRTSFAAKVSSAKCAEVPKGHLALYVGEEMKRFVIPISYLNQPSFQELLSEAEEEFGFDHPMGALTIPCTEDVFLKVTTCFNGC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4336g00033 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 87 IPR003676 GO:0009733
Pral4336g00033 92 Pfam Auxin responsive protein 12 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4336g00033 Pral-Chr4336 490445 490747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4336g00033 24 89 Calmodulin-binding Proteins AT5G20810 56.061 1.67e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4336g00033 K14488 - pcin:129286196 150.214