Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4336g00012 ATGGGTGCAACCTACTGGAAGTTTGATGGAAACTCTTGTCAAATTGAAATGGTGGGGTTGACACCAGTGTCACCCAGTGGATCACAGAGCAGCATTGGTTGTAAATGTTTTTCGGAAAATGGCACTAACTGTCATGTTGTGAGCATTTCGCTCAAGGGGTACAGCCTTCCTGGTGTGCTTCCACCTCAATTGGTCAAGCTTCCTTACCTTAAAGAAGTTGATTTTGCTCTCAATTACCTAAATGGTACAATCCCTAAGGAATGGACTTCAATGAATTTATCTTCAATCTCTCTTCTTGTGAATCGTTTATCTGGGGAAATTCCTAAGGAGCTGGGAAAGATGACGTCTCTAACATACCTGTGCCTTGAATCAAACCAATTTTCCGGTCTTGTTCCCTCTGAGCTTGGAAATCTTGTTAACCTGCAGACATTGATTCTGTCATCCAATAAACTTTCAGGACATTTACCAGTAACATTTGCTCAATTAAAGAACTTGACAGATTTTAGGATAAATGATAACAATTTCAGAGGAACAATTCCTAATTTCATCCAGAATTGGAAACTACTTCAACGACTAGAAATGCACGGAAGTGGACTGGAAGGACCTATCCCATCAACCATATCTCTTCTAAGTAATTTACTTCAACTGAGAATTAGTGATATAGGTGGTCCAAGTCAGGAGTTTCCTTCCCTAAGCAACACGACAGCACTGATAAAATTGGTTTTAAGAAATTGCAATATTACTGGGGAGCTGCCTGCCTACATCTGGACGATGCAGGACTTGGAAATGCTGGATCTCAGTTTTAATAAGTTAGTTGGGGAAATTGCAACAACTGTCAATGCAAAGCATCTTAAATTCGTCTTTCTGACGGGCAATATGCTAAGTGGAAATATACCAGACTCAATCTTGAAGGCTGGAAGCAACGTTGATCTTTCTTACAACAATTTTACACCAAGTCCTGAGCAATCTGCTTGTCGAGATAACCTGAATTTAAACCTAAATTTGTTTCAGAGCTCCTCAGGGCCCAATGATTTAAGGAGAGCTCTGCCATGCACGAAGAATTTCAGTTGCCCAAGATATTCAACTTGTTTGCATGTTAATAGTGGGGGAAAGGATGTAACTGTGAAAGAAAATAAAGAACATTTTCTCTACGCGGGAGATGGAGATTTGTCAGGCGGTACAGCAAAATTTTATTATGATTCCAGCAGTTACTGGGGTTTCAGCAGCACTGGGGACTTCATGGATGACAATGACTTCCTGAATACACGTTACACTGTATTTCTGGAATCCTCAGATGTGCCTAATATATATGCAACAGCTCGTATCTGCCCAATTTCGCTAACTTATTTTCACTATTGCTTGGAAAATGGCAACTATACTGTAAACCTGCATTTTGCAGAGATACAATTTACAAATGATAAGACATATAATAGTCTTGGAAGGCGCATATTTGATATCTATGTTCAGGGAAGATTAGTTCGTAAGGATTTCAATATTGAAGATGAAGCGCATATGGCTCGAAAGCCAATTAAGATACCAGTATATAATGTTCATGTAACAGATAATGTCTTGGATGTTCGATTCTATTGGGCTGGCAAAGGGACTACAAGAATTCCTAGCAGTGGAGTTTATGGTCCCCTGGTATCAGCTTTATCTATTGTTTCTGAGTCTAAACGTTGCTCAGATGTCCGAAAAAGTGGAAGTGCTAATATGACAATTGGAGTTGCAGTTGGAGTTGGGGCTTTCTTCTTAATACTATTTACAGTGGGACTCTTTTGGTGGAGAGGCCACTTCAGAGGAAAATCTGGGAGGAAAAAAGGTGCCGAAGGGCTAGATTCCCATATGGGAACATATAGCCTGAAACAGATAAGAGATGCCACTGACGACTTCAGTCCTGATAACAAGTTAGGGGAAGGCGGTTTTGGTCCTGTCTATAAGGGGCAGTTATCTGATGGTACTTGGGTAGCAGTCAAACAACTTTCTTCCAAGTCCCGGCAAGGGAATCGTGAATTTTTAAATGAGATAGGCATGATATCTTGTTTTCAACACCCTAATCTTGTAAAGCTTCATGGGTGTTGTATTGAAGGGGATCAACTATTGTTGGTTTATGAGTACTTGGAAAATAATAACCTTGCCCGTGCTTTATTTAGCCGAAGAAATCAGCTTAAACTTGATTGGCCTACAAGGCTTAAAATCTGTATTGGCATAGCAAAAGGTCTTGCATTTCTCCATGAAGAATCAGTACTCAAGATTGTTCACCGAGACATCAAGGCCACTAATGTGTTATTGGATGGGAATTTAAATCCTAAGATATCTGACTTTGGATTGGCTAGGCTCAATGAAGAGGAGACCCATATTACTACCCGAGTGGCTGGGACTATAGGATATATGGCACCAGAATATGCATTATGGGGTTACCTCACATACAAGGCGGATGTTTACAGTTTCGGAGTTGTGGTCTTGGAAATTATTAGTGGGAAAAGCAACAGCGATTATATGCCAAGTGATAATTGTGTTTGTCTTTTGGATTGGGCATGCCATTTGCATAAAACTGAAAACATGATACCACTGGTTGATGAAAGGTTGGGATCTGAGGTGAACCCAAAAGAAGTTGAAGTCATGGTGAAAGTAGCTCTTCTCTGCACTAATGCATCACCATCGCTTAGGCCATCGATGTCTGAAGTTGTGAACATGCTCGAAGGAAGAATAAGCATTCCTGAGGTTAACCCAGAGCAAAGTGCTGGTGAAGATTTGAGGTTTAGAGCCTTAAGGGACATTCAAAAGCATAGAGAAAGTCAGAGTGCGAGCACAAGCCAAACAGAAAATTCAACTGATGCCATTGTAAATAGCTCTTCCTTAACATCCGACCATGATTTACACGGGATACGCTCAGAACCATGA 2901 0.4061 MGATYWKFDGNSCQIEMVGLTPVSPSGSQSSIGCKCFSENGTNCHVVSISLKGYSLPGVLPPQLVKLPYLKEVDFALNYLNGTIPKEWTSMNLSSISLLVNRLSGEIPKELGKMTSLTYLCLESNQFSGLVPSELGNLVNLQTLILSSNKLSGHLPVTFAQLKNLTDFRINDNNFRGTIPNFIQNWKLLQRLEMHGSGLEGPIPSTISLLSNLLQLRISDIGGPSQEFPSLSNTTALIKLVLRNCNITGELPAYIWTMQDLEMLDLSFNKLVGEIATTVNAKHLKFVFLTGNMLSGNIPDSILKAGSNVDLSYNNFTPSPEQSACRDNLNLNLNLFQSSSGPNDLRRALPCTKNFSCPRYSTCLHVNSGGKDVTVKENKEHFLYAGDGDLSGGTAKFYYDSSSYWGFSSTGDFMDDNDFLNTRYTVFLESSDVPNIYATARICPISLTYFHYCLENGNYTVNLHFAEIQFTNDKTYNSLGRRIFDIYVQGRLVRKDFNIEDEAHMARKPIKIPVYNVHVTDNVLDVRFYWAGKGTTRIPSSGVYGPLVSALSIVSESKRCSDVRKSGSANMTIGVAVGVGAFFLILFTVGLFWWRGHFRGKSGRKKGAEGLDSHMGTYSLKQIRDATDDFSPDNKLGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCFQHPNLVKLHGCCIEGDQLLLVYEYLENNNLARALFSRRNQLKLDWPTRLKICIGIAKGLAFLHEESVLKIVHRDIKATNVLLDGNLNPKISDFGLARLNEEEXTHITTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVVLEIISGKSNSDYMPSDNCVCLLDWACHLHKTENMIPLVDERLGSEVNPKEVEVMVKVALLCTNASPSLRPSMSEVVNMLEGRISIPEVNPEQSAGEDLRFRALRDIQKHRESQSASTSQTENSTDAIVNSSSLTSDHDLHGIRSEP 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4336g00012 967 Pfam Protein tyrosine and serine/threonine kinase 633 900 IPR001245 GO:0004672|GO:0006468
Pral4336g00012 967 CDD STKc_IRAK 636 902 - -
Pral4336g00012 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase 706 912 - -
Pral4336g00012 967 SUPERFAMILY L domain-like 41 301 - -
Pral4336g00012 967 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 224 344 - -
Pral4336g00012 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Pral4336g00012 967 ProSiteProfiles Protein kinase domain profile. 630 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4336g00012 967 Gene3D Phosphorylase Kinase; domain 1 598 705 - -
Pral4336g00012 967 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Pral4336g00012 967 SMART serkin_6 630 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4336g00012 967 Gene3D Ribonuclease Inhibitor 156 221 IPR032675 -
Pral4336g00012 967 Gene3D Ribonuclease Inhibitor 23 155 IPR032675 -
Pral4336g00012 967 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 1 155 - -
Pral4336g00012 967 SUPERFAMILY Protein kinase-like (PK-like) 613 907 IPR011009 -
Pral4336g00012 967 Gene3D Transferase(Phosphotransferase) domain 1 706 914 - -
Pral4336g00012 967 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 937 - -
Pral4336g00012 967 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 361 556 - -
Pral4336g00012 967 Pfam Malectin domain 363 551 IPR021720 -
Pral4336g00012 967 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 599 705 - -
Pral4336g00012 967 MobiDBLite consensus disorder prediction 925 967 - -
Pral4336g00012 967 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 156 222 - -
Pral4336g00012 967 Gene3D - 360 558 - -
Pral4336g00012 967 Gene3D Ribonuclease Inhibitor 222 332 IPR032675 -
Pral4336g00012 967 MobiDBLite consensus disorder prediction 933 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4336g00012 Pral-Chr4336 89986 100664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4336g00012 1 795 Receptor kinase-like Gene Family AT1G29750 61.731 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4336g00012 PK_Tyr_Ser-Thr 5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4336g00012 - - mtr:11406167 1407.51