Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4336g00008 ATGGCGGAGGCGTCCGCAGCCAATGGGACCCACGACGTTGTTCTGAACGTCAATGACAAGTCCAATGAAGACTCCGGCATCTCCATCTCGGTCCCTTTCTTGCAGAAGTTGGTGGCGGAATTCGCGGGGACATACTTTCTGATATTTGCCGGCCAAGCAGCGGTGATGGTGAACAAGGGCTACGACAACCAAATAACGCAACCGGGGATTTCCATAGTTTGGGGTCTTGTTGTTATGGTTCTTGTCTATTCCCTTGGTCACATTTCCGGTGCTCATTTCAATTCTTCTGTCACTATCGCTTTTGCTTCCACCAAACGTTTTCCCCTCAAACAGGTACCAGCCTATGTATCAGTTCATGTTCTGGCATCGACCCTTGCGAGTGGGACTCTAAGACTTATATTTGAAGGAAGCCGCGACCACTTCCCAGGAACATCAGTTTCTGGGACGTATCTTCAAGGTTTTGTGGTCGAGTTCATCATCACCTTCTACCTCATGTTTATCATATCTGGTGTGGCCACAGATAACAGAGCGATTGGTGAGCTGGCTGGTATCGCCATAGGGGCAACCGTGTTGCTGAATGTTATGTTTGCCGGGCCGGTGACCGGAGCATCAATGAACCCGGCAAGAAGCTTAGGGCCGGCGATAGTGTGGCACCAATACAAAGGAATATGGGTGTACATGACGGCGCCGGTGGCCGGAGCAGTGGCGGGTGCATGGGTGTACAACATGATAAGGTACACCGACAAGCCAATAGGAGAGATCACAAAGATGGCCTCTTTTGTCAAAGCCTCAAACCGTTGTGGTTCCTCAAAGTGA 816 0.5061 MAEASAANGTHDVVLNVNDKSNEDSGISISVPFLQKLVAEFAGTYFLIFAGQAAVMVNKGYDNQITQPGISIVWGLVVMVLVYSLGHISGAHFNSSVTIAFASTKRFPLKQVPAYVSVHVLASTLASGTLRLIFEGSRDHFPGTSVSGTYLQGFVVEFIITFYLMFIISGVATDNRAIGELAGIAIGATVLLNVMFAGPVTGASMNPARSLGPAIVWHQYKGIWVYMTAPVAGAVAGAWVYNMIRYTDKPIGEITKMASFVKASNRCGSSK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4336g00008 271 Pfam Major intrinsic protein 30 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00008 271 SUPERFAMILY Aquaporin-like 30 251 IPR023271 -
Pral4336g00008 271 Gene3D Glycerol uptake facilitator protein. 8 253 IPR023271 -
Pral4336g00008 271 PANTHER AQUAPORIN NIP2-1 22 260 IPR034294 -
Pral4336g00008 271 NCBIfam MIP family channel protein 39 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00008 271 PRINTS Major intrinsic protein family signature 156 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00008 271 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00008 271 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00008 271 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00008 271 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00008 271 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4336g00008 Pral-Chr4336 66841 69591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4336g00008 31 271 Major Intrinsic Protein MIP AT5G37810 56.148 3.99e-94 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4336g00008 K09874 - gmx:100812577 370.548