Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4336g00007 ATGGCGGAGGCGCCTGCAGCCAACGGAACCCATGATGTTGTTCTGAACGTCAATGACAAATCCAATGAAGACTCCGGAATCTCCTTCTCCGTCCCTTTCTTGCAGAAGTTGGTGGCGGAATTCGCGGGGACATACTTTCTGATATTTGCCGGCGAAGCAGCGGTGGTGGTGGACAAGGGCTACGGCAACAAAGTAACGCTTCCTGGGATTTCCATAGTCTGGGGTCTTGTCGTTATGGTTCTTGTCTATTCCGTTGGTCACATCTCTGGGGCTCATTTCAATCCTGCTGTCACTCTTGCTTTTGCTTCTACCAAACGTTTTCCCCTCAAACAGGTGCCAGCTTATGTATCAGTTCAGGTTCTGGCAGCGACCCTTGCGAGTGGGACTCTGAGACTTATATTTGAAGGAAGCCGCGACCACTTCGCAGGAACATTGGTTTCTGGGACGTATCTTCAAGGTTTTGTGGTCGAGTTCATCATCACCTTCTACCTCATGTTTGTCATATCTGGTGTGGCCACAGATAACAGAGCGATTGGTGAGCTGGCTGGTCTCGCGGTGGGGGCAACCGTGTTGCTTAATGTCATGTTTGCTGGGCCGGTGACCGGAGCGTCAATGAACCCCGCCAGGAGCTTGGGGCCGGCAATAGTGTGGCACGAATACAAAGGAATATGGGTGTACATGATAGCGCCGGTGACTGGAGCAATTTCAGGGGCATGGATTTATAACATCATAAGATACACAGACAAGCCAATAAGGGAGATCACAAAGAGTGCTTCTTTCCTCAAAGCTTCCAACCGTTGTGTTTCCTCCAAGTGA 816 0.5049 MAEAPAANGTHDVVLNVNDKSNEDSGISFSVPFLQKLVAEFAGTYFLIFAGEAAVVVDKGYGNKVTLPGISIVWGLVVMVLVYSVGHISGAHFNPAVTLAFASTKRFPLKQVPAYVSVQVLAATLASGTLRLIFEGSRDHFAGTLVSGTYLQGFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGATVLLNVMFAGPVTGASMNPARSLGPAIVWHEYKGIWVYMIAPVTGAISGAWIYNIIRYTDKPIREITKSASFLKASNRCVSSK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4336g00007 271 SUPERFAMILY Aquaporin-like 29 255 IPR023271 -
Pral4336g00007 271 CDD MIP 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00007 271 PANTHER AQUAPORIN NIP2-1 23 262 IPR034294 -
Pral4336g00007 271 Gene3D Glycerol uptake facilitator protein. 11 256 IPR023271 -
Pral4336g00007 271 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00007 271 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00007 271 PRINTS Major intrinsic protein family signature 156 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00007 271 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00007 271 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00007 271 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00007 271 ProSitePatterns MIP family signature. 92 100 IPR022357 -
Pral4336g00007 271 Pfam Major intrinsic protein 30 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00007 271 NCBIfam MIP family channel protein 39 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4336g00007 Pral-Chr4336 61411 64000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4336g00007 31 271 Major Intrinsic Protein MIP AT5G37810 59.016 4.38e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4336g00007 K09874 - gmx:100812577 382.104