Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4336g00006 ATGGCTGAGGCGTCTGCAACTAAAGGAACCCATGAGGTTGTTCTGAACGTCAATGGCAAATCCAATAATAATGAAGATTCCTGCGTCTGCCTCTTGGTCCCTTTCTTGCAGAAGTTGGTGGCGGAATTCGTCGGGACATTCTTTCTGATGTTTGCAGGCGAAGCATCCGAGGTGGTGGACGTGGGCTACGGCAACAAAATAACGCTTACTGGGATTGCCGTAGTTTGGGGTCTCGCCGTTTTAGTTCTCGTCTACGCCGTTAGTCACATCTCCGGCGCCCATTTCAATCCCGCCGTCACCCTCGCTTTTGCTTCTACCGGACGATTCCCCCTCATACAGGTACCGGCTTATATATCAGTTCAGATTCTGGCATCCATTCTTGCGAGCGGGACTCTGAGGCTCATTTTCACAGGAACCCATGACCACTTCGCAGGAACACTATTATCTGGGACGCATCTTCAAGGTTTTGTGGTTGAGTTCATCATCACCTTCTACATCATGCTTGTTAAGTATTCTACCAGTGGTGTGGCCACAGATAACAAAACGATGAGTCAGGTGGCTGGTCTGGCGGTAGGGTCAACCATGTTGCTCAATGTGATGTTTGCCGGGTGA 612 0.5 MAEASATKGTHEVVLNVNGKSNNNEDSCVCLLVPFLQKLVAEFVGTFFLMFAGEASEVVDVGYGNKITLTGIAVVWGLAVLVLVYAVSHISGAHFNPAVTLAFASTGRFPLIQVPAYISVQILASILASGTLRLIFTGTHDHFAGTLLSGTHLQGFVVEFIITFYIMLVKYSTSGVATDNKTMSQVAGLAVGSTMLLNVMFAG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4336g00006 203 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00006 203 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00006 203 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00006 203 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00006 203 PRINTS Major intrinsic protein family signature 188 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00006 203 SUPERFAMILY Aquaporin-like 35 203 IPR023271 -
Pral4336g00006 203 PANTHER AQUAPORIN NIP2-1 23 203 IPR034294 -
Pral4336g00006 203 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Pral4336g00006 203 Pfam Major intrinsic protein 33 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4336g00006 203 Gene3D Glycerol uptake facilitator protein. 4 203 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4336g00006 Pral-Chr4336 48622 49689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4336g00006 20 203 Major Intrinsic Protein MIP AT4G18910 59.162 4.76e-74 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4336g00006 K09874 - gmx:100798526 243.432