Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4336g00001 ATGAAGTGGGGTAGAAGAAAATCCTCCTCAGTTTCTTCTTCATCTAAACGATCTTTCATCTCTCATGTATCTCCCCTTTCATGGCTGTCCAAGTTCAAGAAGATGAGAATCAGCACAGAGCCAGTTCCTGGAAAATTGAAACAAAAGGGTGTGCTGAATTCTCCATCGGCTACTTCAATGCAGTATAGTTGTGGTAATGATGGTAGGTTGTACGGTAAGGATGATGACGCTTTTTGGAGACTTTCATTTGGCGAGGACAGCCATGAACGTAAGAAAAGTGAAGATACTGTGAAATCAGCAAGGCACAATTTGGATATAGGTCGTAGATGGAATGCTGAGAAACAGGAAGGAAGAAGAGAGGGGACTTCAACGTTCAAGGAGGATCAAAGAAAGTTGCCAAATGATACTAAGATTCTACCACAGATGAATGAGCGTAGTCGAGGAAAGGAATTTGAAAAGTTGAGGAGGAGATTTGAGAGGAAAGCTCAAAGAGTATTGGAAGAGCAAGTCTTAAAATTGGAAAGAGAAGCAGAGGATGCATCAGCTTTATCGTTAGTGAAGGAGACGCCACAACTTGGATCACCTGCAACAATTTGGACACCAAGAAGACAATCTTTTGCCCATTTTGATGATTTTAAGAAGTCTAGCCATGCGCGAATGAAAGATCGTGCATTTAATACTCTGAGCCTTCAGAAACATGAGAGACAGATTTTACATCAAACTGAGGAGTTGAAGGCAAAGACTGCAAAGAAGAGTGAGGCACCTCAAGTGAGCGGAGAAATCCAAAGGAGGAAATCAAAGAACAGCACTAAGGTCAAAGTATTTTCTCCAAGGATGAGCTCCAATGTTGAAACATGTAAAATAAAGGCTATAGAAGAGATGAGGAAAGCGAAACTAAAGATGAAGAAAGCAAAGGAGAAAATCAGGGAGGGAAAGCAAGGCTTAGATAGCTTTGCCGTGGTAAAGTTTTCATTGGACCCACAACAAGACTTCAGAGATTCAATGGTTGAGATGATCAGAGAGAAGCAGATCAGCCAGCCAGAGGAAATGGAAGAGCTTTTAGCATGTTATCTGACTTTGAATTCTGATGAATACCATGATCTCATCATCAAGGTATTTCGGCAGGTATGGTTCACCATGAACTTAGATAGTAAGGGTATTAAGTTAAACAAGCAATGCTGCTATGACTAG 1191 0.4106 MKWGRRKSSSVSSSSKRSFISHVSPLSWLSKFKKMRISTEPVPGKLKQKGVLNSPSATSMQYSCGNDGRLYGKDDDAFWRLSFGEDSHERKKSEDTVKSARHNLDIGRRWNAEKQEGRREGTSTFKEDQRKLPNDTKILPQMNERSRGKEFEKLRRRFERKAQRVLEEQVLKLEREAEDASALSLVKETPQLGSPATIWTPRRQSFAHFDDFKKSSHARMKDRAFNTLSLQKHERQILHQTEELKAKTAKKSEAPQVSGEIQRRKSKNSTKVKVFSPRMSSNVETCKIKAIEEMRKAKLKMKKAKEKIREGKQGLDSFAVVKFSLDPQQDFRDSMVEMIREKQISQPEEMEELLACYLTLNSDEYHDLIIKVFRQVWFTMNLDSKGIKLNKQCCYD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4336g00001 396 MobiDBLite consensus disorder prediction 1 21 - -
Pral4336g00001 396 Pfam Transcriptional repressor, ovate 324 380 IPR006458 -
Pral4336g00001 396 NCBIfam uncharacterized plant-specific domain TIGR01568 319 379 IPR006458 -
Pral4336g00001 396 ProSiteProfiles OVATE domain profile. 320 379 IPR006458 -
Pral4336g00001 396 MobiDBLite consensus disorder prediction 243 272 - -
Pral4336g00001 396 Coils Coil 287 314 - -
Pral4336g00001 396 Coils Coil 230 250 - -
Pral4336g00001 396 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 222 380 IPR038933 GO:0045892
Pral4336g00001 396 Coils Coil 163 183 - -
Pral4336g00001 396 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4336g00001 Pral-Chr4336 5973 7163 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral4336g00001 Ovate 2.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4336g00001 - - aprc:113859996 340.502